-<html>\r
-<head>\r
-<title>Creating Sequence Features</title>\r
-</head>\r
-<body>\r
-<strong>Creating Sequence Features</strong>\r
-<p>Jalview can create sequence features from the matches of a <a\r
- href="search.html">regular expression search</a>, or from the currently\r
-selected area via the <strong>"selection→Create\r
-sequence feature"</strong> entry in the selection area popup menu. In both\r
-cases, the <strong>Create Features</strong> dialog box will then be\r
-opened:</p>\r
-<img src="crnewfeature.gif">\r
-<p>Select or enter the attributes for the features being created,\r
-and then press OK to create the new features.</p>\r
-<p>Each attribute is described below:\r
-<ul>\r
- <li><strong>Sequence Feature Name</strong>\r
- <p>Either give the new features a new name or use the menu to\r
- re-use an existing feature name.</p>\r
- </li>\r
- <li><strong>Feature group</strong>\r
- <p>Enter a new group name, or re-use an existing group from the\r
- pull-down menu.</p>\r
- </li>\r
- <li><strong>Feature Colour</strong>\r
- <p>Keep the existing colour for this feature's name and group, or\r
- select the colour box to open a colour chooser to pick a different one.</p>\r
- </li>\r
- <li><strong>Description</strong>\r
- <p>Enter a description for all the features being created. Each\r
- feature defined on a sequence may have its own description that will be\r
- displayed in the tooltip for the feature in that region.</p>\r
- </li>\r
-</ul>\r
-</p><p><em>Sequence Feature Creation was introduced in Jalview Version 2.2</em></p>\r
-</body>\r
-</html>
\ No newline at end of file
+<html>
+<!--
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
+<head>
+<title>Creating Sequence Features</title>
+</head>
+<body>
+ <strong>Creating Sequence Features</strong>
+ <p>
+ Jalview can create sequence features from the matches of a <a
+ href="search.html"
+ >regular expression search</a>, or from the currently selected area
+ via the <strong>"selection→Create sequence
+ feature"</strong> entry in the <a href="../menus/popupMenu.html">selection
+ area popup menu</a>. In both cases, the <strong>Create
+ Features</strong> dialog box will then be opened:
+ </p>
+ <p>
+ <img src="crnewfeature.gif">
+ </p>
+ <p>Select or enter the attributes for the features being created,
+ and then press OK to create the new features.</p>
+ <p>Each attribute is described below:
+ <ul>
+ <li><strong>Sequence Feature Name</strong>
+ <p>Either give the new features a new name or use the menu to
+ re-use an existing feature name.</p></li>
+ <li><strong>Feature group</strong>
+ <p>Enter a new group name, or re-use an existing group from
+ the pull-down menu.</p></li>
+ <li><strong>Feature Colour</strong>
+ <p>Keep the existing colour for this feature's name and group,
+ or select the colour box to open a colour chooser to pick a
+ different one.</p></li>
+ <li><strong>Description</strong>
+ <p>Enter a description for all the features being created.
+ Each feature defined on a sequence may have its own description
+ that will be displayed in the tooltip for the feature in that
+ region.</p></li>
+ </ul>
+ </p>
+ <p>
+ <em>Sequence Feature Creation was introduced in Jalview Version
+ 2.2</em>
+ </p>
+</body>
+</html>
git://source.jalview.org / jalview.git / blobdiff