-<html>\r
-<!--\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)\r
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle\r
- * \r
- * This file is part of Jalview.\r
- * \r
- * Jalview is free software: you can redistribute it and/or\r
- * modify it under the terms of the GNU General Public License \r
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.\r
- * \r
- * Jalview is distributed in the hope that it will be useful, but \r
- * WITHOUT ANY WARRANTY; without even the implied warranty \r
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR \r
- * PURPOSE. See the GNU General Public License for more details.\r
- * \r
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.\r
---!>\r
-<head>\r
-<title>Mapping Between Different Sequences</title>\r
-</head>\r
-<body>\r
-<p><strong>Mapping Between Different Sequences</strong></p>\r
-<p>A new feature in Jalview 2.3 is the ability to map between sequences in different \r
- domains, based on alignment, or by the use of explicit mappings provided by \r
- databases. </p>\r
-<p>The most familiar mapping is the one used to identify\r
-the coordinates corresponding to a displayed sequence when\r
-viewing a PDB file associated with a sequence (see \r
-<a href="viewingpdbs.html">"Viewing PDB Files"</a> \r
-for more information.</p>\r
-<p>The newest form of mapping supported by Jalview is the \r
-correspondence between DNA and protein sequences. This mapping\r
-can be imported directly from EMBL and EMBLCDS database records \r
-retrieved by the <a href="seqfetch.html">Sequence Fetcher</a>, \r
-and allows sequence features to be mapped directly from Uniprot \r
-das sources to their coding region on EMBL sequence records.\r
-</body>\r
-</html>\r
+<html>
+<!--
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
+<head>
+<title>Mapping Between Different Sequences</title>
+</head>
+<body>
+ <p>
+ <strong>Mapping Between Different Sequences</strong>
+ </p>
+ <!-- TODO: review and check if this page is really needed -->
+ <p>A new feature in Jalview 2.3 is the ability to map between
+ sequences in different domains, based on alignment, or by the use of
+ explicit mappings provided by databases.</p>
+ <p>
+ The most familiar mapping is the one used to identify the
+ coordinates corresponding to a displayed sequence when viewing a PDB
+ file associated with a sequence (see <a href="viewingpdbs.html">"Viewing
+ PDB Files"</a> for more information.
+ </p>
+ <p>
+ The newest form of mapping supported by Jalview is the
+ correspondence between DNA and protein sequences. This mapping can
+ be imported directly from EMBL and EMBLCDS database records
+ retrieved by the <a href="seqfetch.html">Sequence Fetcher</a>, and
+ allows sequence features to be mapped directly from UniProt das
+ sources to their coding region on EMBL sequence records.
+ </p>
+ <em><a href="siftsmapping.html">SIFTS Mapping</a> between PDB and
+ UniProt data was introduced in Jalview 2.10</em>
+</body>
+</html>
git://source.jalview.org / jalview.git / blobdiff