* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
* The Jalview Authors are detailed in the 'AUTHORS' file.
-->
-<head><title>Jalview Documentation</title></head>
+<head>
+<title>Jalview Documentation</title>
+</head>
<body>
-<IMG src="Jalview_Logo.png">
-<p><strong>Welcome to Jalview's built in documentation.</strong></p>
-<p>Here are some good places to start:</p><ul>
-<li><a href="whatsNew.html">What's New</a> summarises the new features in this release of Jalview.</li>
-<li>Learn how to <a href="editing/index.html">edit alignments</a> with Jalview.</li>
-<li><a href="features/seqfeatures.html">Import and display sequence features on your alignment</a></li>
-<li>Use <a href="features/viewingpdbs.html">Jmol to view and superpose 3D structures</a> associated with sequences in the alignment</li>
-</ul>
- <p>
- For more information, you might also want to take a look at the
- documentation section of the Jalview website (<a
- href="http://www-test.jalview.org/about/documentation">http://www.jalview.org/about/documentation</a>).
- </p>
- <p>
- If you are using the Jalview Desktop application and are looking for
- something specific, then try the search box (next to the print icon).
- If you're already viewing this in your web browser, then google the
- online version of these pages. If you don't find what you are looking
- for, or want to report a bug or make a feature request, then get in
- contact over at <a href="http://www.jalview.org/community">http://www.jalview.org/community</a>
- </p>
+ <IMG src="Jalview_Logo.png">
+ <p>
+ <strong>Welcome to Jalview's built in documentation.</strong>
+ </p>
+ <p>Here are some good places to start:</p>
+ <ul>
+ <li><a href="whatsNew.html">What's New</a> summarises the new
+ features in this release of Jalview.</li>
+ <li>Learn how to <a href="editing/index.html">edit
+ alignments</a> with Jalview.
+ </li>
+ <li><a href="features/seqfeatures.html">Import and display
+ sequence features on your alignment</a></li>
+ <li>Use <a href="features/viewingpdbs.html">Jmol to view
+ and superpose 3D structures</a> associated with sequences in the
+ alignment
+ </li>
+ </ul>
+ <p>
+ For more information, you might also want to take a look at the
+ documentation section of the Jalview website (<a
+ href="http://www-test.jalview.org/about/documentation">http://www.jalview.org/about/documentation</a>).
+ </p>
+ <p>
+ If you are using the Jalview Desktop application and are looking for
+ something specific, then try the search box (next to the print
+ icon). If you're already viewing this in your web browser, then
+ google the online version of these pages. If you don't find what you
+ are looking for, or want to report a bug or make a feature request,
+ then get in contact over at <a
+ href="http://www.jalview.org/community">http://www.jalview.org/community</a>
+ </p>
- <p><strong>Citing Jalview</strong><br/>If you use Jalview in your work, please cite the Jalview 2 paper in Bioinformatics: </p>
-<p>Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M., Barton, G.J (2009), <br>
- "Jalview version 2: A Multiple Sequence Alignment and Analysis Workbench,"<br>
- <em>Bioinformatics</em> <strong>25</strong> (9) 1189-1191 doi: 10.1093/bioinformatics/btp033</p>
- <p><strong>The Jalview Authors</strong><br/>
- The following people have contributed to Jalview's development:
- <ul>
- <li>Jalview 1
- <ul><li>Michele Clamp</li>
- <li>James Cuff</li>
- <li>Steve Searle</li>
- <li>David Martin</li>
- <li>Geoff Barton</li>
- </ul>
- </li><li>Jalview 2<ul>
- <li>Jim Procter</li>
- <li>Andrew Waterhouse</li>
- <li>Mungo Carstairs</li>
- <li>Tochukwu 'Charles' Ofoegbu</li>
- <li>Jan Engelhardt</li>
- <li>Lauren Lui</li>
- <li>Anne Menard</li>
- <li>Natasha Sherstnev</li>
- <li>Daniel Barton</li>
- <li>David Roldan-Martinez</li>
- <li>David Martin</li>
- <li>Geoff Barton</li>
- </ul>
- </li>
- </ul>
- </p>
+ <p>
+ <strong>Citing Jalview</strong><br />If you use Jalview in your
+ work, please cite the Jalview 2 paper in Bioinformatics:
+ </p>
+ <p>
+ Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M., Barton,
+ G.J (2009), <br> "Jalview version 2: A Multiple Sequence
+ Alignment and Analysis Workbench,"<br> <em>Bioinformatics</em>
+ <strong>25</strong> (9) 1189-1191 doi: 10.1093/bioinformatics/btp033
+ </p>
+ <p>
+ <strong>The Jalview Authors</strong><br /> The following people
+ have contributed to Jalview's development:
+ <ul>
+ <li>Jalview 1
+ <ul>
+ <li>Michele Clamp</li>
+ <li>James Cuff</li>
+ <li>Steve Searle</li>
+ <li>David Martin</li>
+ <li>Geoff Barton</li>
+ </ul>
+ </li>
+ <li>Jalview 2
+ <ul>
+ <li>Jim Procter</li>
+ <li>Andrew Waterhouse</li>
+ <li>Mungo Carstairs</li>
+ <li>Tochukwu 'Charles' Ofoegbu</li>
+ <li>Jan Engelhardt</li>
+ <li>Lauren Lui</li>
+ <li>Anne Menard</li>
+ <li>Natasha Sherstnev</li>
+ <li>Daniel Barton</li>
+ <li>David Roldan-Martinez</li>
+ <li>David Martin</li>
+ <li>Geoff Barton</li>
+ </ul>
+ </li>
+ </ul>
+ </p>
</body>
</html>
git://source.jalview.org / jalview.git / blobdiff