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<head>
<title>Modeller PIR Format IO</title>
</head>
numbering and (possibly) a PDB file reference. The description line
information is always stored in the sequence description string - so
no information is lost if this parsing process fails.</p>
-<p>The 'Modeller Output' flag in the 'Output' tab of the Jalview <a href="preferences.html">Preferences dialog
+<p>The 'Modeller Output' flag in the 'Output' tab of the Jalview <a href="../features/preferences.html">Preferences dialog
box</a> controls whether Jalview will also output MODELLER style PIR
files. In this case, any existing 'non-modeller PIR' header
information in the description string of an alignment is appended to
git://source.jalview.org / jalview.git / blobdiff