ShowConservation, quality, identity not used

[jalview.git] / schemas / jalview.xsd

diff --git a/schemas/jalview.xsd b/schemas/jalview.xsd
index 6c1e65f..3df2951 100755 (executable)
--- a/schemas/jalview.xsd
+++ b/schemas/jalview.xsd
@@ -1,7 +1,7 @@
 <?xml version="1.0" encoding="UTF-8"?>\r
 <xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:vamsas="www.vamsas.ac.uk/jalview/version2" xmlns:jalview="www.jalview.org/colours" xmlns:jv="www.jalview.org" targetNamespace="www.jalview.org" elementFormDefault="qualified" attributeFormDefault="unqualified">\r
-<xs:import namespace="www.vamsas.ac.uk/jalview/version2" schemaLocation="vamsas.xsd"/>\r
-<xs:import namespace="www.jalview.org/colours" schemaLocation="JalviewUserColours.xsd"/>\r
+       <xs:import namespace="www.vamsas.ac.uk/jalview/version2" schemaLocation="vamsas.xsd"/>\r
+       <xs:import namespace="www.jalview.org/colours" schemaLocation="JalviewUserColours.xsd"/>\r
        <xs:complexType name="JalviewModel">\r
                <xs:sequence>\r
                        <xs:element name="creationDate" type="xs:dateTime"/>\r
@@ -73,9 +73,6 @@
                                                <xs:attribute name="renderGaps" type="xs:boolean"/>\r
                                                <xs:attribute name="showSequenceFeatures" type="xs:boolean"/>\r
                                                <xs:attribute name="showAnnotation" type="xs:boolean"/>\r
-                                               <xs:attribute name="showConservation" type="xs:boolean"/>\r
-                                               <xs:attribute name="showQuality" type="xs:boolean"/>\r
-                                               <xs:attribute name="showIdentity" type="xs:boolean"/>\r
                                                <xs:attribute name="xpos" type="xs:int"/>\r
                                                <xs:attribute name="ypos" type="xs:int"/>\r
                                                <xs:attribute name="width" type="xs:int"/>\r
@@ -85,6 +82,9 @@
                                                <xs:attribute name="fontName" type="xs:string"/>\r
                                                <xs:attribute name="fontSize" type="xs:int"/>\r
                                                <xs:attribute name="fontStyle" type="xs:int"/>\r
+                                               <xs:attribute name="viewName" type="xs:string"/>\r
+                                               <xs:attribute name="sequenceSetId" type="xs:string"/>\r
+                                               <xs:attribute name="gatheredViews" type="xs:boolean"/>\r
                                        </xs:complexType>\r
                                </xs:element>\r
                                <xs:element name="UserColours" minOccurs="0" maxOccurs="unbounded">\r
@@ -133,12 +133,21 @@
                </xs:sequence>\r
        </xs:complexType>\r
        <xs:complexType name="feature">\r
+               <xs:sequence>\r
+                       <xs:element name="otherData" minOccurs="0" maxOccurs="unbounded">\r
+                               <xs:complexType>\r
+                                       <xs:attribute name="key" type="xs:string" use="required"/>\r
+                                       <xs:attribute name="value" type="xs:string" use="required"/>\r
+                               </xs:complexType>\r
+                       </xs:element>\r
+               </xs:sequence>\r
                <xs:attribute name="begin" type="xs:int" use="required"/>\r
                <xs:attribute name="end" type="xs:int" use="required"/>\r
                <xs:attribute name="type" type="xs:string" use="required"/>\r
                <xs:attribute name="description" type="xs:string" use="optional"/>\r
                <xs:attribute name="status" type="xs:string" use="optional"/>\r
                <xs:attribute name="featureGroup" type="xs:string" use="optional"/>\r
+               <xs:attribute name="score" type="xs:float" use="optional"/>\r
        </xs:complexType>\r
        <xs:complexType name="pdbentry">\r
                <xs:sequence minOccurs="0" maxOccurs="unbounded">\r