-<?xml version="1.0" encoding="UTF-8"?>\r
-<!--\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)\r
- * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle\r
- * \r
- * This file is part of Jalview.\r
- * \r
- * Jalview is free software: you can redistribute it and/or\r
- * modify it under the terms of the GNU General Public License \r
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.\r
- * \r
- * Jalview is distributed in the hope that it will be useful, but \r
- * WITHOUT ANY WARRANTY; without even the implied warranty \r
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR \r
- * PURPOSE. See the GNU General Public License for more details.\r
- * \r
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.\r
--->\r
-<!-- edited with XMLSpy v2006 sp1 U (http://www.altova.com) by ioh[ (o[ih[oh) -->\r
-<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:vamsas="www.vamsas.org" targetNamespace="www.vamsas.org" elementFormDefault="qualified" attributeFormDefault="unqualified">\r
- <xs:complexType name="VAMSAS">\r
- <xs:sequence>\r
- <xs:element name="Alignment" minOccurs="0" maxOccurs="unbounded">\r
- <xs:complexType>\r
- <xs:sequence>\r
- <xs:element name="Annotation" minOccurs="0">\r
- <xs:complexType>\r
- <xs:sequence>\r
- <xs:element ref="vamsas:annotationElement" maxOccurs="unbounded"/>\r
- <xs:element name="label" type="xs:string"/>\r
- <xs:element name="description" type="xs:string"/>\r
- </xs:sequence>\r
- <xs:attribute name="graph" type="xs:boolean" use="required"/>\r
- <xs:attribute name="graphType" type="xs:int" use="optional"/>\r
- </xs:complexType>\r
- </xs:element>\r
- <xs:element ref="vamsas:SequenceSet"/>\r
- </xs:sequence>\r
- </xs:complexType>\r
- </xs:element>\r
- <xs:element name="Tree" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>\r
- <xs:element ref="vamsas:SequenceSet" minOccurs="0" maxOccurs="unbounded"/>\r
- </xs:sequence>\r
- </xs:complexType>\r
- <xs:element name="SequenceSet">\r
- <xs:complexType>\r
- <xs:sequence>\r
- <xs:element name="Sequence" type="vamsas:SequenceType" maxOccurs="unbounded"/>\r
- <xs:element name="Annotation" minOccurs="0" maxOccurs="unbounded">\r
- <xs:complexType>\r
- <xs:sequence>\r
- <xs:element name="description" type="xs:string" minOccurs="0"/>\r
- <xs:element name="status" type="xs:string" minOccurs="0"/>\r
- <xs:element ref="vamsas:annotationElement" minOccurs="0" maxOccurs="unbounded"/>\r
- </xs:sequence>\r
- <xs:attribute name="type" type="xs:string" use="required"/>\r
- <xs:attribute name="end" type="xs:string" use="required"/>\r
- <xs:attribute name="begin" type="xs:string" use="required"/>\r
- <xs:attribute name="seqRef" type="xs:string" use="required"/>\r
- </xs:complexType>\r
- </xs:element>\r
- </xs:sequence>\r
- <xs:attribute name="gapChar" type="xs:string" use="required"/>\r
- <xs:attribute name="aligned" type="xs:boolean" use="optional"/>\r
- </xs:complexType>\r
- </xs:element>\r
- <xs:element name="annotationElement">\r
- <xs:complexType>\r
- <xs:sequence>\r
- <xs:element name="displayCharacter" type="xs:string"/>\r
- <xs:element name="description" type="xs:string"/>\r
- <xs:element name="secondaryStructure">\r
- <xs:simpleType>\r
- <xs:restriction base="xs:string">\r
- <xs:length value="1"/>\r
- </xs:restriction>\r
- </xs:simpleType>\r
- </xs:element>\r
- <xs:element name="value" type="xs:float"/>\r
- </xs:sequence>\r
- <xs:attribute name="position" type="xs:int" use="required"/>\r
- </xs:complexType>\r
- </xs:element>\r
- <xs:complexType name="SequenceType">\r
- <xs:sequence>\r
- <xs:element name="sequence" type="xs:string"/>\r
- <xs:element name="name" type="xs:string"/>\r
- </xs:sequence>\r
- <xs:attribute name="id" type="xs:string"/>\r
- </xs:complexType>\r
-</xs:schema>\r
+<?xml version="1.0" encoding="UTF-8"?>
+<!--
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+-->
+<!-- edited with XMLSpy v2006 sp1 U (http://www.altova.com) by ioh[ (o[ih[oh) -->
+<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:vamsas="www.vamsas.org" targetNamespace="www.vamsas.org" elementFormDefault="qualified" attributeFormDefault="unqualified">
+ <xs:complexType name="VAMSAS">
+ <xs:sequence>
+ <xs:element name="Alignment" minOccurs="0" maxOccurs="unbounded">
+ <xs:complexType>
+ <xs:sequence>
+ <xs:element name="Annotation" minOccurs="0">
+ <xs:complexType>
+ <xs:sequence>
+ <xs:element ref="vamsas:annotationElement" maxOccurs="unbounded"/>
+ <xs:element name="label" type="xs:string"/>
+ <xs:element name="description" type="xs:string"/>
+ </xs:sequence>
+ <xs:attribute name="graph" type="xs:boolean" use="required"/>
+ <xs:attribute name="graphType" type="xs:int" use="optional"/>
+ </xs:complexType>
+ </xs:element>
+ <xs:element ref="vamsas:SequenceSet"/>
+ </xs:sequence>
+ </xs:complexType>
+ </xs:element>
+ <xs:element name="Tree" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>
+ <xs:element ref="vamsas:SequenceSet" minOccurs="0" maxOccurs="unbounded"/>
+ </xs:sequence>
+ </xs:complexType>
+ <xs:element name="SequenceSet">
+ <xs:complexType>
+ <xs:sequence>
+ <xs:element name="Sequence" type="vamsas:SequenceType" maxOccurs="unbounded"/>
+ <xs:element name="Annotation" minOccurs="0" maxOccurs="unbounded">
+ <xs:complexType>
+ <xs:sequence>
+ <xs:element name="description" type="xs:string" minOccurs="0"/>
+ <xs:element name="status" type="xs:string" minOccurs="0"/>
+ <xs:element ref="vamsas:annotationElement" minOccurs="0" maxOccurs="unbounded"/>
+ </xs:sequence>
+ <xs:attribute name="type" type="xs:string" use="required"/>
+ <xs:attribute name="end" type="xs:string" use="required"/>
+ <xs:attribute name="begin" type="xs:string" use="required"/>
+ <xs:attribute name="seqRef" type="xs:string" use="required"/>
+ </xs:complexType>
+ </xs:element>
+ </xs:sequence>
+ <xs:attribute name="gapChar" type="xs:string" use="required"/>
+ <xs:attribute name="aligned" type="xs:boolean" use="optional"/>
+ </xs:complexType>
+ </xs:element>
+ <xs:element name="annotationElement">
+ <xs:complexType>
+ <xs:sequence>
+ <xs:element name="displayCharacter" type="xs:string"/>
+ <xs:element name="description" type="xs:string"/>
+ <xs:element name="secondaryStructure">
+ <xs:simpleType>
+ <xs:restriction base="xs:string">
+ <xs:length value="1"/>
+ </xs:restriction>
+ </xs:simpleType>
+ </xs:element>
+ <xs:element name="value" type="xs:float"/>
+ </xs:sequence>
+ <xs:attribute name="position" type="xs:int" use="required"/>
+ </xs:complexType>
+ </xs:element>
+ <xs:complexType name="SequenceType">
+ <xs:sequence>
+ <xs:element name="sequence" type="xs:string"/>
+ <xs:element name="name" type="xs:string"/>
+ </xs:sequence>
+ <xs:attribute name="id" type="xs:string"/>
+ </xs:complexType>
+</xs:schema>
git://source.jalview.org / jalview.git / blobdiff