Highlight doesnt use offset

[jalview.git] / src / MCview / PDBCanvas.java

diff --git a/src/MCview/PDBCanvas.java b/src/MCview/PDBCanvas.java
index f0806a8..33dfb8b 100755 (executable)
--- a/src/MCview/PDBCanvas.java
+++ b/src/MCview/PDBCanvas.java
@@ -557,13 +557,13 @@ public class PDBCanvas extends JPanel implements MouseListener, MouseMotionListe
 \r
             if(highlightBond1!=null && highlightBond1==tmpBond)\r
             {\r
-              g.setColor(tmpBond.endCol.brighter().brighter().brighter());\r
+              g.setColor(tmpBond.endCol.brighter().brighter().brighter().brighter());\r
               drawLine(g, xmid, ymid, xend, yend);\r
             }\r
 \r
             if(highlightBond2!=null && highlightBond2==tmpBond)\r
             {\r
-              g.setColor(tmpBond.startCol.brighter().brighter().brighter());\r
+              g.setColor(tmpBond.startCol.brighter().brighter().brighter().brighter());\r
               drawLine(g, xstart, ystart, xmid, ymid);\r
             }\r
 \r
@@ -846,7 +846,8 @@ public class PDBCanvas extends JPanel implements MouseListener, MouseMotionListe
     highlightBond1 = null;\r
     highlightBond2 = null;\r
 \r
-    int index = ii - mainchain.seqstart - mainchain.offset+1;\r
+    int index = ii - mainchain.seqstart;\r
+\r
     if(index <0 )\r
       return;\r
 \r