Atom tmpatom = new Atom(line);\r
\r
//Jalview is only interested in CA bonds????\r
- // if(!tmpatom.name.equals("CA"))\r
- // continue;\r
+ if(!tmpatom.name.equals("CA"))\r
+ continue;\r
\r
tmpchain = findChain(tmpatom.chain);\r
if ( tmpchain != null)\r