JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensing glob

[jalview.git] / src / jalview / api / AlignViewControllerGuiI.java

diff --git a/src/jalview/api/AlignViewControllerGuiI.java b/src/jalview/api/AlignViewControllerGuiI.java
index b08a0aa..db429bc 100644 (file)
--- a/src/jalview/api/AlignViewControllerGuiI.java
+++ b/src/jalview/api/AlignViewControllerGuiI.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -20,8 +20,6 @@
  */
 package jalview.api;
 
-import java.util.List;
-
 import jalview.commands.CommandI;
 import jalview.schemes.ColourSchemeI;
 
@@ -45,12 +43,23 @@ public interface AlignViewControllerGuiI
   void addHistoryItem(CommandI command);
 
   void setShowSeqFeatures(boolean show);
-  
+
   void setMenusForViewport();
-  
+
   void changeColour(ColourSchemeI cs);
 
-  void hideColumns(List<int[]> colsToHide);
+  /**
+   * trigger an update of the UI in response to a model data change, and if
+   * necessary enable the display of sequence feature annotation on the view.
+   * 
+   * @param enableIfNecessary
+   */
+  void refreshFeatureUI(boolean enableIfNecessary);
 
-  void syncHiddenSequences();
+  /**
+   * get the Feature Settings control panel for the alignment view if one exists
+   * 
+   * @return
+   */
+  FeatureSettingsControllerI getFeatureSettingsUI();
 }