JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix delegate of

[jalview.git] / src / jalview / api / analysis / DistanceModelI.java

diff --git a/src/jalview/api/analysis/ScoreModelI.java b/src/jalview/api/analysis/DistanceModelI.java
similarity index 89%
rename from src/jalview/api/analysis/ScoreModelI.java
rename to src/jalview/api/analysis/DistanceModelI.java
index 332bba5..3ceeed2 100644 (file)
--- a/src/jalview/api/analysis/ScoreModelI.java
+++ b/src/jalview/api/analysis/DistanceModelI.java
@@ -22,7 +22,11 @@ package jalview.api.analysis;
 
 import jalview.datamodel.AlignmentView;
 
-public interface ScoreModelI
+/**
+ * An interface that describes classes that can compute distances between pairs
+ * of sequences in an alignment
+ */
+public interface DistanceModelI
 {
 
   float[][] findDistances(AlignmentView seqData);