JAL-1780 more support for export setting for flatfile output

[jalview.git] / src / jalview / appletgui / AlignViewport.java

diff --git a/src/jalview/appletgui/AlignViewport.java b/src/jalview/appletgui/AlignViewport.java
index 607dc05..d7ec681 100644 (file)
--- a/src/jalview/appletgui/AlignViewport.java
+++ b/src/jalview/appletgui/AlignViewport.java
@@ -23,6 +23,7 @@ package jalview.appletgui;
 import java.awt.Font;
 
 import jalview.analysis.NJTree;
+import jalview.api.AlignExportSettingI;
 import jalview.api.AlignViewportI;
 import jalview.api.FeatureRenderer;
 import jalview.bin.JalviewLite;
@@ -60,7 +61,7 @@ public class AlignViewport extends AlignmentViewport implements
 
   private FeatureRenderer featureRenderer;
 
-  private boolean includeHiddenRegion = true;
+  private AlignExportSettingI exportSettings;
 
   public void finalize()
   {
@@ -485,14 +486,15 @@ public class AlignViewport extends AlignmentViewport implements
 
   }
 
-  public boolean isIncludeHiddenRegion()
+  public AlignExportSettingI getExportSettings()
   {
-    return includeHiddenRegion;
+    return exportSettings;
   }
 
-  public void setIncludeHiddenRegion(boolean includeHiddenRegion)
+  public void setExportSettings(AlignExportSettingI exportSettings)
   {
-    this.includeHiddenRegion = includeHiddenRegion;
+    this.exportSettings = exportSettings;
   }
 
+
 }