JAL-2808 JAL-2069 FeatureTypeSettings (with new Filters tab) replaces FeatureColourCh...

[jalview.git] / src / jalview / appletgui / FeatureSettings.java

diff --git a/src/jalview/appletgui/FeatureSettings.java b/src/jalview/appletgui/FeatureSettings.java
index 9a67499..39a2747 100755 (executable)
--- a/src/jalview/appletgui/FeatureSettings.java
+++ b/src/jalview/appletgui/FeatureSettings.java
@@ -20,6 +20,10 @@
  */
 package jalview.appletgui;
 
+import static jalview.viewmodel.seqfeatures.FeatureRendererModel.COLOUR_COLUMN;
+import static jalview.viewmodel.seqfeatures.FeatureRendererModel.SHOW_COLUMN;
+import static jalview.viewmodel.seqfeatures.FeatureRendererModel.TYPE_COLUMN;
+
 import jalview.api.FeatureColourI;
 import jalview.api.FeatureSettingsControllerI;
 import jalview.datamodel.AlignmentI;
@@ -584,18 +588,23 @@ public class FeatureSettings extends Panel
     Component[] comps = featurePanel.getComponents();
     int cSize = comps.length;
 
-    Object[][] tmp = new Object[cSize][3];
+    /*
+     * temporary! leave column[2] empty - used for Filter in
+     * gui.FeatureSettings
+     */
+    int columnCount = 4;
+    Object[][] tmp = new Object[cSize][columnCount];
     int tmpSize = 0;
     for (int i = 0; i < cSize; i++)
     {
       MyCheckbox check = (MyCheckbox) comps[i];
-      tmp[tmpSize][0] = check.type;
-      tmp[tmpSize][1] = fr.getFeatureStyle(check.type);
-      tmp[tmpSize][2] = new Boolean(check.getState());
+      tmp[tmpSize][TYPE_COLUMN /* 0 */] = check.type;
+      tmp[tmpSize][COLOUR_COLUMN /* 1 */] = fr.getFeatureStyle(check.type);
+      tmp[tmpSize][SHOW_COLUMN /* 3 */] = new Boolean(check.getState());
       tmpSize++;
     }
 
-    Object[][] data = new Object[tmpSize][3];
+    Object[][] data = new Object[tmpSize][columnCount];
     System.arraycopy(tmp, 0, data, 0, tmpSize);
 
     fr.setFeaturePriority(data);