/*\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)\r
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle\r
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)\r
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle\r
* \r
* This file is part of Jalview.\r
* \r
{\r
Vector sel = selection.getSequences(null);\r
this.selected = new Vector();\r
- selseqs = selection.getSequencesInOrder(alignment, false);\r
+ selseqs = selection.getSequencesInOrder(alignment, selectedRegionOnly);\r
}\r
else\r
{\r