Merge branch 'develop' into features/JAL-2446NCList

[jalview.git] / src / jalview / datamodel / Mapping.java

diff --git a/src/jalview/datamodel/Mapping.java b/src/jalview/datamodel/Mapping.java
index 66425d2..328b96a 100644 (file)
--- a/src/jalview/datamodel/Mapping.java
+++ b/src/jalview/datamodel/Mapping.java
@@ -182,8 +182,8 @@ public class Mapping
       }
       if (!toRanges.hasNext())
       {
-        throw new NoSuchElementException("Ran out of peptide at position "
-                + toPosition);
+        throw new NoSuchElementException(
+                "Ran out of peptide at position " + toPosition);
       }
       currentToRange = toRanges.next();
       toPosition = currentToRange[0];
@@ -667,8 +667,8 @@ public class Mapping
         to[f * 2] = r[0];
         to[f * 2 + 1] = r[1];
       }
-      copy.setMap(new MapList(from, to, map.getFromRatio(), map
-              .getToRatio()));
+      copy.setMap(
+              new MapList(from, to, map.getFromRatio(), map.getToRatio()));
     }
     return copy;
   }
@@ -715,7 +715,8 @@ public class Mapping
    * @param gapChar
    * @return
    */
-  public Iterator<AlignedCodon> getCodonIterator(SequenceI seq, char gapChar)
+  public Iterator<AlignedCodon> getCodonIterator(SequenceI seq,
+          char gapChar)
   {
     return new AlignedCodonIterator(seq, gapChar);
   }
@@ -726,8 +727,8 @@ public class Mapping
   @Override
   public String toString()
   {
-    return String.format("%s %s", this.map.toString(), this.to == null ? ""
-            : this.to.getName());
+    return String.format("%s %s", this.map.toString(),
+            this.to == null ? "" : this.to.getName());
   }
 
   /**