JAL-1065 JAL-1066 generic 'annotation collection updated' method called when alignmen...

[jalview.git] / src / jalview / datamodel / SequenceGroup.java

diff --git a/src/jalview/datamodel/SequenceGroup.java b/src/jalview/datamodel/SequenceGroup.java
index 94e359a..b0eabff 100755 (executable)
--- a/src/jalview/datamodel/SequenceGroup.java
+++ b/src/jalview/datamodel/SequenceGroup.java
@@ -477,7 +477,10 @@ public class SequenceGroup implements AnnotatedCollectionI
     {
       return;
     }
-
+    if (cs!=null)
+    {
+      cs.alignmentChanged(this);
+    }
     try
     {
       Hashtable cnsns[] = AAFrequency.calculate(sequences, startRes,