annotationPanelMenuItem.setState(av.showAnnotation);
viewBoxesMenuItem.setSelected(av.showBoxes);
viewTextMenuItem.setSelected(av.showText);
- showUnconservedMenuItem.setSelected(av.showUnconserved);
+ showNonconservedMenuItem.setSelected(av.showUnconserved);
showGroupConsensus.setSelected(av.showGroupConsensus);
showGroupConservation.setSelected(av.showGroupConservation);
showConsensusHistogram.setSelected(av.showConsensusHistogram);
*/
protected void showUnconservedMenuItem_actionPerformed(ActionEvent e)
{
- viewport.setShowUnconserved(showUnconservedMenuItem.getState());
+ viewport.setShowUnconserved(showNonconservedMenuItem.getState());
alignPanel.paintAlignment(true);
}
// set view properties for each group
for (int g = 0; g < gps.length; g++)
{
- gps[g].setShowunconserved(viewport.getShowUnconserved());
+ gps[g].setShowNonconserved(viewport.getShowUnconserved());
gps[g].setIncludeAllConsSymbols(viewport
.isIncludeAllConsensusSymbols());
viewport.alignment.addGroup(gps[g]);