JAL-3253-applet adds NOMENUBAR, NOSTATUS, NOCALCULATION, SHOWOVERVIEW

[jalview.git] / src / jalview / gui / AlignViewport.java

diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java
index 7c3dca0..eb9c180 100644 (file)
--- a/src/jalview/gui/AlignViewport.java
+++ b/src/jalview/gui/AlignViewport.java
@@ -214,7 +214,7 @@ public class AlignViewport extends AlignmentViewport
 
     setRightAlignIds(Cache.getDefault(Preferences.RIGHT_ALIGN_IDS, false));
     setCentreColumnLabels(Cache.getDefault(Preferences.CENTRE_COLUMN_LABELS, false));
-    autoCalculateConsensus = Cache.getDefault(Preferences.AUTO_CALC_CONSENSUS, true);
+    autoCalculateConsensusAndConservation = Cache.getDefault(Preferences.AUTO_CALC_CONSENSUS, true);
 
     setPadGaps(Cache.getDefault(Preferences.PAD_GAPS, true));
     setShowNPFeats(Cache.getDefault(Preferences.SHOW_NPFEATS_TOOLTIP, true));