Merge branch 'develop' into feature/JAL-2759

[jalview.git] / src / jalview / gui / AnnotationLabels.java

diff --git a/src/jalview/gui/AnnotationLabels.java b/src/jalview/gui/AnnotationLabels.java
index 76c711f..45350fd 100755 (executable)
--- a/src/jalview/gui/AnnotationLabels.java
+++ b/src/jalview/gui/AnnotationLabels.java
@@ -705,7 +705,7 @@ public class AnnotationLabels extends JPanel
         d = ap.annotationSpaceFillerHolder.getPreferredSize();
         ap.annotationSpaceFillerHolder
                 .setPreferredSize(new Dimension(d.width, d.height - dif));
-        ap.paintAlignment(true);
+        ap.paintAlignment(true, false);
       }
 
       ap.addNotify();
@@ -855,7 +855,7 @@ public class AnnotationLabels extends JPanel
               }
             }
 
-            ap.paintAlignment(false);
+            ap.paintAlignment(false, false);
             PaintRefresher.Refresh(ap, ap.av.getSequenceSetId());
             ap.av.sendSelection();
           }
@@ -912,7 +912,7 @@ public class AnnotationLabels extends JPanel
               sg.addSequence(aa[selectedRow].sequenceRef, false);
             }
             ap.av.setSelectionGroup(sg);
-            ap.paintAlignment(false);
+            ap.paintAlignment(false, false);
             PaintRefresher.Refresh(ap, ap.av.getSequenceSetId());
             ap.av.sendSelection();
           }