import jalview.api.AlignmentViewPanel;
import jalview.api.FeatureSettingsModelI;
import jalview.bin.Cache;
+import jalview.bin.Console;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.DBRefEntry;
import jalview.util.MapList;
import jalview.util.MappingUtils;
import jalview.util.MessageManager;
+import jalview.viewmodel.seqfeatures.FeatureRendererModel;
import jalview.ws.SequenceFetcher;
import java.util.ArrayList;
.isShowSequenceFeatures();
newFrame.setShowSeqFeatures(showSequenceFeatures);
copyThis.setShowSeqFeatures(showSequenceFeatures);
- FeatureRenderer myFeatureStyling = alignFrame.alignPanel
+ FeatureRendererModel myFeatureStyling = alignFrame.alignPanel
.getSeqPanel().seqCanvas.getFeatureRenderer();
/*
* copy feature rendering settings to split frame
*/
- FeatureRenderer fr1 = newFrame.alignPanel.getSeqPanel().seqCanvas
+ FeatureRendererModel fr1 = newFrame.alignPanel.getSeqPanel().seqCanvas
.getFeatureRenderer();
fr1.transferSettings(myFeatureStyling);
fr1.findAllFeatures(true);
- FeatureRenderer fr2 = copyThis.alignPanel.getSeqPanel().seqCanvas
+ FeatureRendererModel fr2 = copyThis.alignPanel.getSeqPanel().seqCanvas
.getFeatureRenderer();
fr2.transferSettings(myFeatureStyling);
fr2.findAllFeatures(true);
new OOMWarning("whilst fetching crossreferences", e);
} catch (Throwable e)
{
- Cache.log.error("Error when finding crossreferences", e);
+ Console.error("Error when finding crossreferences", e);
} finally
{
alignFrame.setProgressBar(MessageManager.formatMessage(