-/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
-*/
-
-package jalview.gui;
-
-import jalview.jbgui.GCutAndPasteTransfer;
-import java.awt.*;
-import java.awt.event.ActionEvent;
-import java.awt.datatransfer.*;
-import jalview.datamodel.Alignment;
-import jalview.io.FormatAdapter;
-import jalview.datamodel.SequenceI;
-import javax.swing.JOptionPane;
-import jalview.io.IdentifyFile;
-
-public class CutAndPasteTransfer extends GCutAndPasteTransfer
-{
- public void setForInput()
- {
- getContentPane().add(inputButtonPanel, java.awt.BorderLayout.SOUTH);
- }
-
- public String getText()
- {
- return textarea.getText();
- }
-
- public void setText(String text)
- {
- textarea.setText(text);
- }
-
- public void copyItem_actionPerformed(ActionEvent e)
- {
- Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();
- c.setContents( new StringSelection( textarea.getText()) , null ) ;
- }
-
- public void pasteMenu_actionPerformed(ActionEvent e)
- {
- Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();
- Transferable contents = c.getContents(this);
- if (contents == null)
- return;
- try{
- textarea.setText( (String) contents.getTransferData(DataFlavor.
- stringFlavor));
- }catch(Exception ex){}
- }
-
- public void ok_actionPerformed(ActionEvent e)
- {
- String format = IdentifyFile.Identify(getText(), "Paste");
- SequenceI [] sequences = null;
-
- if (FormatAdapter.formats.contains( format ))
- sequences = FormatAdapter.readFile(getText(), "Paste", format);
-
-
- if(sequences!=null)
- {
- AlignFrame af = new AlignFrame(new Alignment(sequences));
- af.currentFileFormat = format;
- Desktop.addInternalFrame(af, "Cut & Paste input - " + format,
- AlignFrame.NEW_WINDOW_WIDTH,
- AlignFrame.NEW_WINDOW_HEIGHT);
- af.statusBar.setText("Successfully pasted alignment file");
- try
- { af.setMaximum(Preferences.showFullscreen); }
- catch (Exception ex)
- {}
- try
- {
- this.setClosed(true);
- }
- catch (Exception ex)
- {}
-
-
- }
- else
- JOptionPane.showInternalMessageDialog(Desktop.desktop,
- "Couldn't read the pasted text.\n"
- + "Formats currently supported are\n"
- +
- "Fasta, MSF, Clustal, BLC, PIR, MSP, and PFAM",
- "Error parsing text",
- JOptionPane.WARNING_MESSAGE);
- }
-
- public void cancel_actionPerformed(ActionEvent e)
- {
- try{
- this.setClosed(true);
- }catch(Exception ex){}
- }
-
-
-}
+/*\r
+ * Jalview - A Sequence Alignment Editor and Viewer\r
+ * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ *\r
+ * This program is free software; you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License\r
+ * as published by the Free Software Foundation; either version 2\r
+ * of the License, or (at your option) any later version.\r
+ *\r
+ * This program is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
+ * GNU General Public License for more details.\r
+ *\r
+ * You should have received a copy of the GNU General Public License\r
+ * along with this program; if not, write to the Free Software\r
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
+ */\r
+package jalview.gui;\r
+\r
+import java.awt.*;\r
+import java.awt.datatransfer.*;\r
+import java.awt.event.*;\r
+import javax.swing.*;\r
+\r
+import jalview.datamodel.*;\r
+import jalview.io.*;\r
+import jalview.jbgui.*;\r
+\r
+public class CutAndPasteTransfer\r
+ extends GCutAndPasteTransfer\r
+{\r
+ public void setForInput()\r
+ {\r
+ getContentPane().add(inputButtonPanel, java.awt.BorderLayout.SOUTH);\r
+ }\r
+\r
+ public String getText()\r
+ {\r
+ return textarea.getText();\r
+ }\r
+\r
+ public void setText(String text)\r
+ {\r
+ textarea.setText(text);\r
+ }\r
+\r
+ public void copyItem_actionPerformed(ActionEvent e)\r
+ {\r
+ Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();\r
+ c.setContents(new StringSelection(textarea.getText()), null);\r
+ }\r
+\r
+ public void pasteMenu_actionPerformed(ActionEvent e)\r
+ {\r
+ Clipboard c = Toolkit.getDefaultToolkit().getSystemClipboard();\r
+ Transferable contents = c.getContents(this);\r
+\r
+ if (contents == null)\r
+ {\r
+ return;\r
+ }\r
+\r
+ try\r
+ {\r
+ textarea.setText( (String) contents.getTransferData(\r
+ DataFlavor.stringFlavor));\r
+ }\r
+ catch (Exception ex)\r
+ {\r
+ }\r
+ }\r
+\r
+ public void ok_actionPerformed(ActionEvent e)\r
+ {\r
+ String format = IdentifyFile.Identify(getText(), "Paste");\r
+ SequenceI[] sequences = null;\r
+\r
+ if (FormatAdapter.formats.contains(format))\r
+ {\r
+ sequences = FormatAdapter.readFile(getText(), "Paste", format);\r
+ }\r
+\r
+ if (sequences != null)\r
+ {\r
+ AlignFrame af = new AlignFrame(new Alignment(sequences));\r
+ af.currentFileFormat = format;\r
+ Desktop.addInternalFrame(af, "Cut & Paste input - " + format,\r
+ AlignFrame.NEW_WINDOW_WIDTH,\r
+ AlignFrame.NEW_WINDOW_HEIGHT);\r
+ af.statusBar.setText("Successfully pasted alignment file");\r
+\r
+ try\r
+ {\r
+ af.setMaximum(Preferences.showFullscreen);\r
+ }\r
+ catch (Exception ex)\r
+ {\r
+ }\r
+\r
+ try\r
+ {\r
+ this.setClosed(true);\r
+ }\r
+ catch (Exception ex)\r
+ {\r
+ }\r
+ }\r
+ else\r
+ {\r
+ JOptionPane.showInternalMessageDialog(Desktop.desktop,\r
+ "Couldn't read the pasted text.\n" +\r
+ "Formats currently supported are\n" +\r
+ "Fasta, MSF, Clustal, BLC, PIR, MSP, and PFAM",\r
+ "Error parsing text",\r
+ JOptionPane.WARNING_MESSAGE);\r
+ }\r
+ }\r
+\r
+ public void cancel_actionPerformed(ActionEvent e)\r
+ {\r
+ try\r
+ {\r
+ this.setClosed(true);\r
+ }\r
+ catch (Exception ex)\r
+ {\r
+ }\r
+ }\r
+}\r
git://source.jalview.org / jalview.git / blobdiff