*/
package jalview.gui;
+import jalview.api.AlignViewportI;
+import jalview.api.AlignmentViewPanel;
+import jalview.bin.Cache;
+import jalview.io.FileLoader;
+import jalview.io.FormatAdapter;
+import jalview.io.IdentifyFile;
+import jalview.io.JalviewFileChooser;
+import jalview.io.JalviewFileView;
+import jalview.jbgui.GSplitFrame;
+import jalview.jbgui.GStructureViewer;
+import jalview.schemes.ColourSchemeI;
+import jalview.structure.StructureSelectionManager;
+import jalview.util.ImageMaker;
+import jalview.util.MessageManager;
+import jalview.viewmodel.AlignmentViewport;
+import jalview.ws.params.ParamManager;
+
import java.awt.BorderLayout;
import java.awt.Color;
import java.awt.Dimension;
import javax.swing.event.MenuEvent;
import javax.swing.event.MenuListener;
-import jalview.api.AlignViewportI;
-import jalview.api.AlignmentViewPanel;
-import jalview.bin.Cache;
-import jalview.io.FileLoader;
-import jalview.io.FormatAdapter;
-import jalview.io.IdentifyFile;
-import jalview.io.JalviewFileChooser;
-import jalview.io.JalviewFileView;
-import jalview.jbgui.GSplitFrame;
-import jalview.jbgui.GStructureViewer;
-import jalview.structure.StructureSelectionManager;
-import jalview.util.ImageMaker;
-import jalview.util.MessageManager;
-import jalview.viewmodel.AlignmentViewport;
-import jalview.ws.params.ParamManager;
-
/**
* Jalview Desktop
*
private static final int THREE = 3;
+ private static AlignFrame currentAlignFrame;
+
+ private static ColourSchemeI currentGlobalColourScheme;
+
public static jalview.ws.jws1.Discoverer discoverer;
public static Object[] jalviewClipboard;
{
new FileLoader().LoadFile(viewport, choice, FormatAdapter.FILE,
format);
+
+ viewport.setShowSequenceFeatures(true);
+ viewport.getAlignPanel().alignFrame.changeColour(Desktop
+ .getCurrentGlobalColourScheme());
+ viewport.getAlignPanel().alignFrame.setMenusForViewport();
}
else
{
myTopFrame.setDisplayedView(myTopFrame.alignPanel);
}
+
+ public static AlignFrame getCurrentAlignFrame()
+ {
+ return currentAlignFrame;
+ }
+
+ public static void setCurrentAlignFrame(AlignFrame currentAlignFrame)
+ {
+ Desktop.currentAlignFrame = currentAlignFrame;
+ }
+
+ public static ColourSchemeI getCurrentGlobalColourScheme()
+ {
+ return currentGlobalColourScheme;
+ }
+
+ public static void setCurrentGlobalColourScheme(
+ ColourSchemeI currentGlobalColourScheme)
+ {
+ Desktop.currentGlobalColourScheme = currentGlobalColourScheme;
+ }
+
+
}