JAL-3048 code reordered for JalviewJS compliance

[jalview.git] / src / jalview / gui / Jalview2XML.java

diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java
index 9285754..81816aa 100644 (file)
--- a/src/jalview/gui/Jalview2XML.java
+++ b/src/jalview/gui/Jalview2XML.java
@@ -52,7 +52,6 @@ import jalview.schemabinding.version2.Annotation;
 import jalview.schemabinding.version2.AnnotationColours;
 import jalview.schemabinding.version2.AnnotationElement;
 import jalview.schemabinding.version2.CalcIdParam;
-import jalview.schemabinding.version2.Colour;
 import jalview.schemabinding.version2.CompoundMatcher;
 import jalview.schemabinding.version2.DBRef;
 import jalview.schemabinding.version2.Features;
@@ -2678,6 +2677,7 @@ public class Jalview2XML
     if (errorMessage != null)
     {
       final String finalErrorMessage = errorMessage;
+      errorMessage = null;
       if (raiseGUI)
       {
         javax.swing.SwingUtilities.invokeLater(new Runnable()
@@ -2695,10 +2695,10 @@ public class Jalview2XML
       }
       else
       {
-        System.err.println("Problem loading Jalview file: " + errorMessage);
+        System.err.println(
+                "Problem loading Jalview file: " + finalErrorMessage);
       }
     }
-    errorMessage = null;
   }
 
   Map<String, String> alreadyLoadedPDB = new HashMap<>();