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Merge branch 'merge/develop_JAL-3725' into develop
[jalview.git]
/
src
/
jalview
/
gui
/
PopupMenu.java
diff --git
a/src/jalview/gui/PopupMenu.java
b/src/jalview/gui/PopupMenu.java
index
6cd763b
..
7b284a9
100644
(file)
--- a/
src/jalview/gui/PopupMenu.java
+++ b/
src/jalview/gui/PopupMenu.java
@@
-839,15
+839,14
@@
public class PopupMenu extends JPopupMenu implements ColourChangeListener
/*
* show local rather than linked feature coordinates
*/
/*
* show local rather than linked feature coordinates
*/
- int[] beginRange = mf.getMappedPositions(start, start);
- int[] endRange = mf.getMappedPositions(end, end);
- if (beginRange == null || endRange == null)
+ int[] localRange = mf.getMappedPositions(start, end);
+ if (localRange == null)
{
// e.g. variant extending to stop codon so not mappable
return;
}
{
// e.g. variant extending to stop codon so not mappable
return;
}
- start = beginRange[0];
- end = endRange[endRange.length - 1];
+ start = localRange[0];
+ end = localRange[localRange.length - 1];
}
StringBuilder desc = new StringBuilder();
desc.append(sf.getType()).append(" ").append(String.valueOf(start));
}
StringBuilder desc = new StringBuilder();
desc.append(sf.getType()).append(" ").append(String.valueOf(start));