JAL-845 code/refactoring/tests related to linking DNA and protein

[jalview.git] / src / jalview / gui / TreePanel.java

diff --git a/src/jalview/gui/TreePanel.java b/src/jalview/gui/TreePanel.java
index ce28d39..0c5ff32 100755 (executable)
--- a/src/jalview/gui/TreePanel.java
+++ b/src/jalview/gui/TreePanel.java
@@ -39,6 +39,7 @@ import jalview.io.JalviewFileView;
 import jalview.io.NewickFile;
 import jalview.jbgui.GTreePanel;
 import jalview.util.MessageManager;
+import jalview.viewmodel.AlignmentViewport;
 
 import java.awt.Font;
 import java.awt.Graphics;
@@ -134,7 +135,7 @@ public class TreePanel extends GTreePanel
     return treeCanvas.av.getAlignment();
   }
 
-  public AlignViewport getViewPort()
+  public AlignmentViewport getViewPort()
   {
     return treeCanvas.av;
   }
@@ -597,7 +598,7 @@ public class TreePanel extends GTreePanel
 
   public CommandI sortAlignmentIn(AlignmentPanel ap)
   {
-    AlignViewport av = ap.av;
+    AlignmentViewport av = ap.av;
     SequenceI[] oldOrder = av.getAlignment().getSequencesArray();
     AlignmentSorter.sortByTree(av.getAlignment(), tree);
     CommandI undo;