*/
package jalview.gui;
+import java.util.Locale;
+
import jalview.bin.Cache;
import jalview.io.JalviewFileChooser;
import jalview.io.JalviewFileView;
import jalview.jbgui.GUserDefinedColours;
-import jalview.schemabinding.version2.Colour;
-import jalview.schemabinding.version2.JalviewUserColours;
import jalview.schemes.ColourSchemeI;
import jalview.schemes.ColourSchemeLoader;
import jalview.schemes.ColourSchemes;
import jalview.util.ColorUtils;
import jalview.util.Format;
import jalview.util.MessageManager;
+import jalview.util.Platform;
+import jalview.xml.binding.jalview.JalviewUserColours;
+import jalview.xml.binding.jalview.JalviewUserColours.Colour;
+import jalview.xml.binding.jalview.ObjectFactory;
import java.awt.Color;
import java.awt.Font;
import javax.swing.JInternalFrame;
import javax.swing.event.ChangeEvent;
import javax.swing.event.ChangeListener;
+import javax.xml.bind.JAXBContext;
+import javax.xml.bind.Marshaller;
/**
* This panel allows the user to assign colours to Amino Acid residue codes, and
* flag is true if the colour scheme has been changed since the
* dialog was opened, or the changes last saved to file
*/
- boolean changed;
+ boolean changedButNotSaved;
JInternalFrame frame;
UserDefinedColours()
{
super();
- selectedButtons = new ArrayList<JButton>();
+ selectedButtons = new ArrayList<>();
}
void showFrame()
if (upperCaseButtons == null)
{
- upperCaseButtons = new ArrayList<JButton>();
+ upperCaseButtons = new ArrayList<>();
}
for (int i = 0; i < 20; i++)
if (lowerCaseButtons == null)
{
- lowerCaseButtons = new ArrayList<JButton>();
+ lowerCaseButtons = new ArrayList<>();
}
for (int i = 0; i < 20; i++)
{
int row = i / cols + 1;
int index = (row * cols) + i;
- JButton button = makeButton(ResidueProperties.aa[i].toLowerCase(),
- ResidueProperties.aa[i].toLowerCase(), lowerCaseButtons, i);
+ JButton button = makeButton(ResidueProperties.aa[i].toLowerCase(Locale.ROOT),
+ ResidueProperties.aa[i].toLowerCase(Locale.ROOT), lowerCaseButtons, i);
buttonPanel.add(button, index);
}
button.setForeground(ColorUtils.brighterThan(newColour));
}
- changed = true;
+ changedButNotSaved = true;
}
/**
*/
protected void warnIfUnsavedChanges()
{
- if (!changed)
- {
- return;
- }
+ // BH 2018 no warning in JavaScript TODO
- String name = schemeName.getText().trim();
- if (oldColourScheme != null && !"".equals(name)
- && name.equals(oldColourScheme.getSchemeName()))
- {
- String message = MessageManager.formatMessage("label.scheme_changed",
- name);
- String title = MessageManager.getString("label.save_changes");
- String[] options = new String[] { title,
- MessageManager.getString("label.dont_save_changes"), };
- final String question = JvSwingUtils.wrapTooltip(true, message);
- int response = JvOptionPane.showOptionDialog(Desktop.desktop,
- question, title, JvOptionPane.DEFAULT_OPTION,
- JvOptionPane.PLAIN_MESSAGE, null, options, options[0]);
-
- boolean saved = false;
- if (response == 0)
+ if (!Platform.isJS() && changedButNotSaved)
+ /**
+ * Java only
+ *
+ * @j2sIgnore
+ */
+ {
+ String name = schemeName.getText().trim();
+ if (oldColourScheme != null && !"".equals(name)
+ && name.equals(oldColourScheme.getSchemeName()))
{
- /*
- * prompt to save changes to file
- */
- saved = savebutton_actionPerformed();
- }
+ String message = MessageManager
+ .formatMessage("label.scheme_changed", name);
+ String title = MessageManager.getString("label.save_changes");
+ String[] options = new String[] { title,
+ MessageManager.getString("label.dont_save_changes"), };
+ final String question = JvSwingUtils.wrapTooltip(true, message);
+ int response = JvOptionPane.showOptionDialog(Desktop.desktop,
+ question, title, JvOptionPane.DEFAULT_OPTION,
+ JvOptionPane.PLAIN_MESSAGE, null, options, options[0]);
+
+ if (response == 0)
+ {
+ /*
+ * prompt to save changes to file; if done,
+ * resets 'changed' flag to false
+ */
+ savebutton_actionPerformed();
+ }
- /*
- * if user chooses not to save (either in this dialog or in the
- * save as dialogs), treat this as a new user defined colour scheme
- */
- if (!saved)
- {
/*
- * clear scheme name and re-apply as an anonymous scheme
+ * if user chooses not to save (either in this dialog or in the
+ * save as dialogs), treat this as a new user defined colour scheme
*/
- schemeName.setText("");
- applyButton_actionPerformed();
+ if (changedButNotSaved)
+ {
+ /*
+ * clear scheme name and re-apply as an anonymous scheme
+ */
+ schemeName.setText("");
+ applyButton_actionPerformed();
+ }
}
}
}
@Override
protected void loadbutton_actionPerformed()
{
- upperCaseButtons = new ArrayList<JButton>();
- lowerCaseButtons = new ArrayList<JButton>();
-
+ upperCaseButtons = new ArrayList<>();
+ lowerCaseButtons = new ArrayList<>();
JalviewFileChooser chooser = new JalviewFileChooser("jc",
"Jalview User Colours");
chooser.setFileView(new JalviewFileView());
chooser.setDialogTitle(
MessageManager.getString("label.load_colour_scheme"));
chooser.setToolTipText(MessageManager.getString("action.load"));
-
- int value = chooser.showOpenDialog(this);
-
- if (value != JalviewFileChooser.APPROVE_OPTION)
- {
- return;
- }
- File choice = chooser.getSelectedFile();
- Cache.setProperty(LAST_DIRECTORY, choice.getParent());
-
- UserColourScheme ucs = ColourSchemeLoader
- .loadColourScheme(choice.getAbsolutePath());
- Color[] colors = ucs.getColours();
- schemeName.setText(ucs.getSchemeName());
-
- if (ucs.getLowerCaseColours() != null)
- {
- caseSensitive.setSelected(true);
- lcaseColour.setEnabled(true);
- resetButtonPanel(true);
- for (int i = 0; i < lowerCaseButtons.size(); i++)
- {
- JButton button = lowerCaseButtons.get(i);
- button.setBackground(ucs.getLowerCaseColours()[i]);
- }
- }
- else
- {
- caseSensitive.setSelected(false);
- lcaseColour.setEnabled(false);
- resetButtonPanel(false);
- }
-
- for (int i = 0; i < upperCaseButtons.size(); i++)
- {
- JButton button = upperCaseButtons.get(i);
- button.setBackground(colors[i]);
- }
-
- addNewColourScheme(choice.getPath());
+ chooser.setResponseHandler(0, new Runnable()
+ {
+ @Override
+ public void run()
+ {
+ File choice = chooser.getSelectedFile();
+ Cache.setProperty(LAST_DIRECTORY, choice.getParent());
+
+ UserColourScheme ucs = ColourSchemeLoader
+ .loadColourScheme(choice.getAbsolutePath());
+ Color[] colors = ucs.getColours();
+ schemeName.setText(ucs.getSchemeName());
+
+ if (ucs.getLowerCaseColours() != null)
+ {
+ caseSensitive.setSelected(true);
+ lcaseColour.setEnabled(true);
+ resetButtonPanel(true);
+ for (int i = 0; i < lowerCaseButtons.size(); i++)
+ {
+ JButton button = lowerCaseButtons.get(i);
+ button.setBackground(ucs.getLowerCaseColours()[i]);
+ }
+ }
+ else
+ {
+ caseSensitive.setSelected(false);
+ lcaseColour.setEnabled(false);
+ resetButtonPanel(false);
+ }
+
+ for (int i = 0; i < upperCaseButtons.size(); i++)
+ {
+ JButton button = upperCaseButtons.get(i);
+ button.setBackground(colors[i]);
+ }
+
+ addNewColourScheme(choice.getPath());
+ }
+ });
+
+ chooser.showOpenDialog(this);
}
/**
* <li>Don't apply the changes if the currently selected scheme is different,
* to allow a new scheme to be configured and saved but not applied</li>
* </ul>
- * Returns true if the scheme is saved to file, false if it is not
- *
- * @return
+ * If the scheme is saved to file, the 'changed' flag field is reset to false.
*/
@Override
- protected boolean savebutton_actionPerformed()
+ protected void savebutton_actionPerformed()
{
String name = schemeName.getText().trim();
if (name.length() < 1)
.getString("label.user_colour_scheme_must_have_name"),
MessageManager.getString("label.no_name_colour_scheme"),
JvOptionPane.WARNING_MESSAGE);
- return false;
}
- if (ColourSchemes.getInstance().nameExists(name))
+ if (!Platform.isJS() && ColourSchemes.getInstance().nameExists(name))
{
- int reply = JvOptionPane.showInternalConfirmDialog(Desktop.desktop,
- MessageManager.formatMessage(
- "label.colour_scheme_exists_overwrite", new Object[]
- { name, name }),
- MessageManager.getString("label.duplicate_scheme_name"),
- JvOptionPane.YES_NO_OPTION);
- if (reply != JvOptionPane.YES_OPTION)
+ /**
+ * java only
+ *
+ * @j2sIgnore
+ */
{
- return false;
+ int reply = JvOptionPane.showInternalConfirmDialog(Desktop.desktop,
+ MessageManager.formatMessage(
+ "label.colour_scheme_exists_overwrite", new Object[]
+ { name, name }),
+ MessageManager.getString("label.duplicate_scheme_name"),
+ JvOptionPane.YES_NO_OPTION);
+ if (reply != JvOptionPane.YES_OPTION)
+ {
+ return;
+ }
}
}
+
JalviewFileChooser chooser = new JalviewFileChooser("jc",
"Jalview User Colours");
chooser.setDialogTitle(
MessageManager.getString("label.save_colour_scheme"));
chooser.setToolTipText(MessageManager.getString("action.save"));
-
- int value = chooser.showSaveDialog(this);
-
- if (value != JalviewFileChooser.APPROVE_OPTION)
+ int option = chooser.showSaveDialog(this);
+ if (option == JalviewFileChooser.APPROVE_OPTION)
{
- return false;
- }
+ File file = chooser.getSelectedFile();
+ UserColourScheme updatedScheme = addNewColourScheme(file.getPath());
+ saveToFile(file);
+ changedButNotSaved = false;
- File file = chooser.getSelectedFile();
- UserColourScheme updatedScheme = addNewColourScheme(file.getPath());
- saveToFile(file);
- changed = false;
-
- /*
- * changes saved - apply to alignment if we are changing
- * the currently selected colour scheme; also make the updated
- * colours the 'backout' scheme on Cancel
- */
- if (oldColourScheme != null
- && name.equals(oldColourScheme.getSchemeName()))
- {
- oldColourScheme = updatedScheme;
- applyButton_actionPerformed();
+ /*
+ * changes saved - apply to alignment if we are changing
+ * the currently selected colour scheme; also make the updated
+ * colours the 'backout' scheme on Cancel
+ */
+ if (oldColourScheme != null
+ && name.equals(oldColourScheme.getSchemeName()))
+ {
+ oldColourScheme = updatedScheme;
+ applyButton_actionPerformed();
+ }
}
- return true;
}
/**
Colour col = new Colour();
col.setName(button.getText());
col.setRGB(Format.getHexString(button.getBackground()));
- ucs.addColour(col);
+ ucs.getColour().add(col);
}
- ucs.marshal(out);
+ JAXBContext jaxbContext = JAXBContext
+ .newInstance(JalviewUserColours.class);
+ Marshaller jaxbMarshaller = jaxbContext.createMarshaller();
+ jaxbMarshaller.marshal(
+ new ObjectFactory().createJalviewUserColours(ucs), out);
+ // ucs.marshal(out);
out.close();
} catch (Exception ex)
{
protected void cancelButton_actionPerformed()
{
ap.alignFrame.changeColour(oldColourScheme);
- ap.paintAlignment(true);
+ ap.paintAlignment(true, true);
try
{
git://source.jalview.org / jalview.git / blobdiff