sg.setEndRes( refSeq.findIndex( sg.getEndRes() +1) -1 );\r
}\r
\r
- al.addGroup(sg);\r
- annotationsHash.put(sg.getName(), sg);\r
+ if(sg.getSize()>0)\r
+ {\r
+ al.addGroup(sg);\r
+ annotationsHash.put(sg.getName(), sg);\r
+ }\r
}\r
\r
void addProperties(AlignmentI al, StringTokenizer st)\r