JAL-2909 Tidy up bam file cigar code

[jalview.git] / src / jalview / io / FileLoader.java

diff --git a/src/jalview/io/FileLoader.java b/src/jalview/io/FileLoader.java
index f26d6da..11432bd 100755 (executable)
--- a/src/jalview/io/FileLoader.java
+++ b/src/jalview/io/FileLoader.java
@@ -308,6 +308,11 @@ public class FileLoader implements Runnable
       loadtime = -System.currentTimeMillis();
       AlignmentI al = null;
 
+      if (FileFormat.Bam.equals(format))
+      {
+        // ask the user which bit of the bam they want to load
+      }
+
       if (FileFormat.Jalview.equals(format))
       {
         if (source != null)