JAL-2089 patch broken merge to master for Release 2.10.0b1

[jalview.git] / src / jalview / io / SimpleBlastFile.java

diff --git a/src/jalview/io/SimpleBlastFile.java b/src/jalview/io/SimpleBlastFile.java
index 35a498c..f4dc5a2 100644 (file)
--- a/src/jalview/io/SimpleBlastFile.java
+++ b/src/jalview/io/SimpleBlastFile.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -20,10 +20,13 @@
  */
 package jalview.io;
 
-import java.io.*;
-import java.util.*;
+import jalview.datamodel.Sequence;
+import jalview.datamodel.SequenceI;
 
-import jalview.datamodel.*;
+import java.io.IOException;
+import java.util.Enumeration;
+import java.util.Hashtable;
+import java.util.Vector;
 
 /**
  * parse a simple blast report. Attempt to cope with query anchored and pairwise
@@ -197,9 +200,8 @@ public class SimpleBlastFile extends AlignFile
             if (seqentry == null)
             {
               padseq = true; // prepend gaps to new sequences in this block
-              seqentry = new Object[]
-              { new StringBuffer(), new long[]
-              { rstart, rend } };
+              seqentry = new Object[] { new StringBuffer(),
+                  new long[] { rstart, rend } };
               seqentries.addElement(seqentry);
               seqhash.put(sqid, seqentry);