fix merge conflicts for finess on JAL-1140 (introduced by 1a8f953dd71a9e319e910261927...

[jalview.git] / src / jalview / io / TCoffeeScoreFile.java

diff --git a/src/jalview/io/TCoffeeScoreFile.java b/src/jalview/io/TCoffeeScoreFile.java
index 9776b56..158ba6b 100644 (file)
--- a/src/jalview/io/TCoffeeScoreFile.java
+++ b/src/jalview/io/TCoffeeScoreFile.java
@@ -33,15 +33,6 @@ import java.util.Map;
 import java.util.regex.Matcher;
 import java.util.regex.Pattern;
 
-import javax.xml.parsers.ParserConfigurationException;
-
-import org.xml.sax.SAXException;
-
-import fr.orsay.lri.varna.exceptions.ExceptionFileFormatOrSyntax;
-import fr.orsay.lri.varna.exceptions.ExceptionLoadingFailed;
-import fr.orsay.lri.varna.exceptions.ExceptionPermissionDenied;
-import fr.orsay.lri.varna.exceptions.ExceptionUnmatchedClosingParentheses;
-
 /**
  * A file parse for T-Coffee score ascii format. This file contains the
  * alignment consensus for each resude in any sequence.
@@ -97,13 +88,13 @@ import fr.orsay.lri.varna.exceptions.ExceptionUnmatchedClosingParentheses;
  */
 public class TCoffeeScoreFile extends AlignFile {
        
-  public TCoffeeScoreFile(String inFile, String type) throws Exception
+  public TCoffeeScoreFile(String inFile, String type) throws IOException
   {
     super(inFile, type);
 
   }
 
-  public TCoffeeScoreFile(FileParse source) throws Exception
+  public TCoffeeScoreFile(FileParse source) throws IOException
   {
     super(source);
   }