JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensing glob
[jalview.git] / src / jalview / jbgui / GFinder.java
index ee1a4ff..af1760f 100755 (executable)
@@ -1,39 +1,57 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.jbgui;
 
-import java.awt.*;
-import java.awt.event.*;
-import javax.swing.*;
-import javax.swing.event.*;
-
-import jalview.datamodel.*;
-import jalview.io.*;
+import jalview.datamodel.AlignmentI;
+import jalview.io.FormatAdapter;
+import jalview.util.MessageManager;
+
+import java.awt.BorderLayout;
+import java.awt.Dimension;
+import java.awt.Font;
+import java.awt.GridLayout;
+import java.awt.Insets;
+import java.awt.event.ActionEvent;
+import java.awt.event.KeyEvent;
+
+import javax.swing.JButton;
+import javax.swing.JCheckBox;
+import javax.swing.JLabel;
+import javax.swing.JPanel;
+import javax.swing.JScrollPane;
+import javax.swing.JTextArea;
+import javax.swing.SwingConstants;
+import javax.swing.SwingUtilities;
+import javax.swing.event.CaretEvent;
+import javax.swing.event.CaretListener;
 
 public class GFinder extends JPanel
 {
-  JLabel jLabel1 = new JLabel();
+  JLabel jLabelFind = new JLabel();
 
   protected JButton findAll = new JButton();
 
   protected JButton findNext = new JButton();
 
-  JPanel jPanel1 = new JPanel();
+  JPanel actionsPanel = new JPanel();
 
   GridLayout gridLayout1 = new GridLayout();
 
@@ -43,7 +61,7 @@ public class GFinder extends JPanel
 
   protected JTextArea textfield = new JTextArea();
 
-  BorderLayout borderLayout1 = new BorderLayout();
+  BorderLayout mainBorderLayout = new BorderLayout();
 
   JPanel jPanel2 = new JPanel();
 
@@ -57,6 +75,10 @@ public class GFinder extends JPanel
 
   protected JCheckBox caseSensitive = new JCheckBox();
 
+  protected JCheckBox searchDescription = new JCheckBox();
+
+  GridLayout optionsGridLayout = new GridLayout();
+
   public GFinder()
   {
     try
@@ -70,11 +92,11 @@ public class GFinder extends JPanel
 
   private void jbInit() throws Exception
   {
-    jLabel1.setFont(new java.awt.Font("Verdana", 0, 12));
-    jLabel1.setText("Find");
-    this.setLayout(borderLayout1);
+    jLabelFind.setFont(new java.awt.Font("Verdana", 0, 12));
+    jLabelFind.setText(MessageManager.getString("label.find"));
+    this.setLayout(mainBorderLayout);
     findAll.setFont(new java.awt.Font("Verdana", 0, 12));
-    findAll.setText("Find all");
+    findAll.setText(MessageManager.getString("action.find_all"));
     findAll.addActionListener(new java.awt.event.ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -83,7 +105,7 @@ public class GFinder extends JPanel
       }
     });
     findNext.setFont(new java.awt.Font("Verdana", 0, 12));
-    findNext.setText("Find Next");
+    findNext.setText(MessageManager.getString("action.find_next"));
     findNext.addActionListener(new java.awt.event.ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -91,14 +113,14 @@ public class GFinder extends JPanel
         findNext_actionPerformed(e);
       }
     });
-    jPanel1.setLayout(gridLayout1);
+    actionsPanel.setLayout(gridLayout1);
     gridLayout1.setHgap(0);
     gridLayout1.setRows(3);
     gridLayout1.setVgap(2);
     createNewGroup.setEnabled(false);
     createNewGroup.setFont(new java.awt.Font("Verdana", 0, 12));
     createNewGroup.setMargin(new Insets(0, 0, 0, 0));
-    createNewGroup.setText("New Feature");
+    createNewGroup.setText(MessageManager.getString("label.new_feature"));
     createNewGroup.addActionListener(new java.awt.event.ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -124,25 +146,38 @@ public class GFinder extends JPanel
       }
     });
 
-    borderLayout1.setHgap(5);
-    borderLayout1.setVgap(5);
+    mainBorderLayout.setHgap(5);
+    mainBorderLayout.setVgap(5);
     jPanel4.setLayout(borderLayout2);
     jPanel2.setPreferredSize(new Dimension(10, 1));
     jPanel3.setPreferredSize(new Dimension(10, 1));
     caseSensitive.setHorizontalAlignment(SwingConstants.LEFT);
-    caseSensitive.setText("Match Case");
-    jPanel1.add(findNext, null);
-    jPanel1.add(findAll, null);
-    jPanel1.add(createNewGroup, null);
-    this.add(jLabel1, java.awt.BorderLayout.WEST);
-    this.add(jPanel1, java.awt.BorderLayout.EAST);
+    caseSensitive.setText(MessageManager.getString("label.match_case"));
+
+    searchDescription.setText(MessageManager
+            .getString("label.include_description"));
+
+    actionsPanel.add(findNext, null);
+    actionsPanel.add(findAll, null);
+    actionsPanel.add(createNewGroup, null);
+    this.add(jLabelFind, java.awt.BorderLayout.WEST);
+    this.add(actionsPanel, java.awt.BorderLayout.EAST);
     this.add(jPanel2, java.awt.BorderLayout.SOUTH);
     this.add(jPanel3, java.awt.BorderLayout.NORTH);
     this.add(jPanel4, java.awt.BorderLayout.CENTER);
-    jPanel4.add(jScrollPane1, java.awt.BorderLayout.CENTER);
+    jPanel4.add(jScrollPane1, java.awt.BorderLayout.NORTH);
     jScrollPane1.getViewport().add(textfield);
-    jPanel4.add(jPanel6, java.awt.BorderLayout.NORTH);
-    jPanel4.add(caseSensitive, java.awt.BorderLayout.SOUTH);
+
+    JPanel optionsPanel = new JPanel();
+
+    optionsGridLayout.setHgap(0);
+    optionsGridLayout.setRows(2);
+    optionsGridLayout.setVgap(2);
+    optionsPanel.setLayout(optionsGridLayout);
+    optionsPanel.add(caseSensitive, null);
+    optionsPanel.add(searchDescription, null);
+
+    jPanel4.add(optionsPanel, java.awt.BorderLayout.WEST);
   }
 
   protected void findNext_actionPerformed(ActionEvent e)
@@ -175,7 +210,7 @@ public class GFinder extends JPanel
         public void run()
         {
           String str = textfield.getText();
-          Alignment al = null;
+          AlignmentI al = null;
           try
           {
             al = new FormatAdapter().readFile(str, "Paste", "FASTA");