/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.jbgui;
-import java.awt.*;
-import java.awt.event.*;
-
-import javax.swing.*;
-import javax.swing.event.*;
+import jalview.util.ImageMaker.TYPE;
+import jalview.util.MessageManager;
+
+import java.awt.BorderLayout;
+import java.awt.Color;
+import java.awt.FlowLayout;
+import java.awt.Font;
+import java.awt.GridLayout;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+
+import javax.swing.JButton;
+import javax.swing.JCheckBoxMenuItem;
+import javax.swing.JComboBox;
+import javax.swing.JInternalFrame;
+import javax.swing.JLabel;
+import javax.swing.JMenu;
+import javax.swing.JMenuBar;
+import javax.swing.JMenuItem;
+import javax.swing.JPanel;
+import javax.swing.event.MenuEvent;
+import javax.swing.event.MenuListener;
public class GPCAPanel extends JInternalFrame
{
- JPanel jPanel2 = new JPanel();
-
- JLabel jLabel1 = new JLabel();
-
- JLabel jLabel2 = new JLabel();
-
- JLabel jLabel3 = new JLabel();
-
- protected JComboBox xCombobox = new JComboBox();
-
- protected JComboBox yCombobox = new JComboBox();
-
- protected JComboBox zCombobox = new JComboBox();
-
- protected JButton resetButton = new JButton();
-
- FlowLayout flowLayout1 = new FlowLayout();
-
- BorderLayout borderLayout1 = new BorderLayout();
-
- JMenuBar jMenuBar1 = new JMenuBar();
-
- JMenu fileMenu = new JMenu();
+ private static final Font VERDANA_12 = new Font("Verdana", 0, 12);
- JMenu saveMenu = new JMenu();
+ protected JComboBox<String> xCombobox = new JComboBox<>();
- JMenuItem eps = new JMenuItem();
+ protected JComboBox<String> yCombobox = new JComboBox<>();
- JMenuItem png = new JMenuItem();
-
- JMenuItem print = new JMenuItem();
-
- JMenuItem outputValues = new JMenuItem();
-
- JMenuItem outputPoints = new JMenuItem();
-
- JMenuItem outputProjPoints = new JMenuItem();
+ protected JComboBox<String> zCombobox = new JComboBox<>();
protected JMenu viewMenu = new JMenu();
protected JCheckBoxMenuItem showLabels = new JCheckBoxMenuItem();
- JMenuItem bgcolour = new JMenuItem();
-
- JMenuItem originalSeqData = new JMenuItem();
-
protected JMenu associateViewsMenu = new JMenu();
- protected JMenu calcSettings = new JMenu();
-
- protected JCheckBoxMenuItem nuclSetting = new JCheckBoxMenuItem();
-
- protected JCheckBoxMenuItem protSetting = new JCheckBoxMenuItem();
-
- protected JCheckBoxMenuItem jvVersionSetting = new JCheckBoxMenuItem();
-
protected JLabel statusBar = new JLabel();
- protected GridLayout statusPanelLayout = new GridLayout();
-
protected JPanel statusPanel = new JPanel();
+ protected JMenuItem originalSeqData;
+
+ /**
+ * Constructor
+ */
public GPCAPanel()
{
try
yCombobox.addItem("dim " + i);
zCombobox.addItem("dim " + i);
}
-
- setJMenuBar(jMenuBar1);
}
private void jbInit() throws Exception
{
- this.getContentPane().setLayout(borderLayout1);
- jPanel2.setLayout(flowLayout1);
- jLabel1.setFont(new java.awt.Font("Verdana", 0, 12));
+ this.getContentPane().setLayout(new BorderLayout());
+ JPanel jPanel2 = new JPanel();
+ jPanel2.setLayout(new FlowLayout());
+ JLabel jLabel1 = new JLabel();
+ jLabel1.setFont(VERDANA_12);
jLabel1.setText("x=");
- jLabel2.setFont(new java.awt.Font("Verdana", 0, 12));
+ JLabel jLabel2 = new JLabel();
+ jLabel2.setFont(VERDANA_12);
jLabel2.setText("y=");
- jLabel3.setFont(new java.awt.Font("Verdana", 0, 12));
+ JLabel jLabel3 = new JLabel();
+ jLabel3.setFont(VERDANA_12);
jLabel3.setText("z=");
jPanel2.setBackground(Color.white);
jPanel2.setBorder(null);
- zCombobox.setFont(new java.awt.Font("Verdana", 0, 12));
- zCombobox.addActionListener(new java.awt.event.ActionListener()
+ zCombobox.setFont(VERDANA_12);
+ zCombobox.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- zCombobox_actionPerformed(e);
+ doDimensionChange();
}
});
- yCombobox.setFont(new java.awt.Font("Verdana", 0, 12));
- yCombobox.addActionListener(new java.awt.event.ActionListener()
+ yCombobox.setFont(VERDANA_12);
+ yCombobox.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- yCombobox_actionPerformed(e);
+ doDimensionChange();
}
});
- xCombobox.setFont(new java.awt.Font("Verdana", 0, 12));
- xCombobox.addActionListener(new java.awt.event.ActionListener()
+ xCombobox.setFont(VERDANA_12);
+ xCombobox.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- xCombobox_actionPerformed(e);
+ doDimensionChange();
}
});
- resetButton.setFont(new java.awt.Font("Verdana", 0, 12));
- resetButton.setText("Reset");
- resetButton.addActionListener(new java.awt.event.ActionListener()
+ JButton resetButton = new JButton();
+ resetButton.setFont(VERDANA_12);
+ resetButton.setText(MessageManager.getString("action.reset"));
+ resetButton.addActionListener(new ActionListener()
{
@Override
public void actionPerformed(ActionEvent e)
{
- resetButton_actionPerformed(e);
+ resetButton_actionPerformed();
}
});
- fileMenu.setText("File");
- saveMenu.setText("Save as");
- eps.setText("EPS");
+ JMenu fileMenu = new JMenu();
+ fileMenu.setText(MessageManager.getString("action.file"));
+ JMenu saveMenu = new JMenu();
+ saveMenu.setText(MessageManager.getString("action.save_as"));
+ JMenuItem eps = new JMenuItem("EPS");
eps.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- eps_actionPerformed(e);
+ makePCAImage(TYPE.EPS);
}
});
- png.setText("PNG");
+ JMenuItem png = new JMenuItem("PNG");
png.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- png_actionPerformed(e);
+ makePCAImage(TYPE.PNG);
}
});
- outputValues.setText("Output Values...");
+ JMenuItem outputValues = new JMenuItem();
+ outputValues.setText(MessageManager.getString("label.output_values"));
outputValues.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- outputValues_actionPerformed(e);
+ outputValues_actionPerformed();
}
});
- outputPoints.setText("Output points...");
+ JMenuItem outputPoints = new JMenuItem();
+ outputPoints.setText(MessageManager.getString("label.output_points"));
outputPoints.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- outputPoints_actionPerformed(e);
+ outputPoints_actionPerformed();
}
});
- outputProjPoints.setText("Output transformed points...");
+ JMenuItem outputProjPoints = new JMenuItem();
+ outputProjPoints.setText(
+ MessageManager.getString("label.output_transformed_points"));
outputProjPoints.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- outputProjPoints_actionPerformed(e);
+ outputProjPoints_actionPerformed();
}
});
+ JMenuItem print = new JMenuItem();
+ print.setText(MessageManager.getString("action.print"));
print.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- print_actionPerformed(e);
+ print_actionPerformed();
}
});
- viewMenu.setText("View");
+ viewMenu.setText(MessageManager.getString("action.view"));
viewMenu.addMenuListener(new MenuListener()
{
+ @Override
public void menuSelected(MenuEvent e)
{
viewMenu_menuSelected();
}
+ @Override
public void menuDeselected(MenuEvent e)
{
}
+ @Override
public void menuCanceled(MenuEvent e)
{
}
});
- showLabels.setText("Show Labels");
+ showLabels.setText(MessageManager.getString("label.show_labels"));
showLabels.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- showLabels_actionPerformed(e);
+ showLabels_actionPerformed();
}
});
- print.setText("Print");
- bgcolour.setText("Background Colour...");
+ JMenuItem bgcolour = new JMenuItem();
+ bgcolour.setText(MessageManager.getString("action.background_colour"));
bgcolour.addActionListener(new ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
- bgcolour_actionPerformed(e);
+ bgcolour_actionPerformed();
}
});
- originalSeqData.setText("Input Data...");
+ originalSeqData = new JMenuItem();
+ originalSeqData.setText(MessageManager.getString("label.input_data"));
originalSeqData.addActionListener(new ActionListener()
{
- public void actionPerformed(ActionEvent e)
- {
- originalSeqData_actionPerformed(e);
- }
- });
- associateViewsMenu.setText("Associate Nodes With");
- calcSettings.setText("Change Parameters");
- nuclSetting.setText("Nucleotide matrix");
- protSetting.setText("Protein matrix");
- nuclSetting.addActionListener(new ActionListener()
- {
-
@Override
- public void actionPerformed(ActionEvent arg0)
+ public void actionPerformed(ActionEvent e)
{
- nuclSetting_actionPerfomed(arg0);
+ originalSeqData_actionPerformed();
}
});
- protSetting.addActionListener(new ActionListener()
- {
+ associateViewsMenu.setText(
+ MessageManager.getString("label.associate_nodes_with"));
- @Override
- public void actionPerformed(ActionEvent arg0)
- {
- protSetting_actionPerfomed(arg0);
- }
- });
- jvVersionSetting.setText("Jalview PCA Calculation");
- jvVersionSetting.addActionListener(new ActionListener()
- {
- @Override
- public void actionPerformed(ActionEvent arg0)
- {
- jvVersionSetting_actionPerfomed(arg0);
- }
- });
- calcSettings.add(jvVersionSetting);
- calcSettings.add(nuclSetting);
- calcSettings.add(protSetting);
- statusPanel.setLayout(statusPanelLayout);
- statusBar.setFont(new java.awt.Font("Verdana", 0, 12));
+ statusPanel.setLayout(new GridLayout());
+ statusBar.setFont(VERDANA_12);
// statusPanel.setBackground(Color.lightGray);
// statusBar.setBackground(Color.lightGray);
// statusPanel.add(statusBar, null);
jPanel2.add(jLabel3, null);
jPanel2.add(zCombobox, null);
jPanel2.add(resetButton, null);
+
+ JMenuBar jMenuBar1 = new JMenuBar();
jMenuBar1.add(fileMenu);
jMenuBar1.add(viewMenu);
- jMenuBar1.add(calcSettings);
+ setJMenuBar(jMenuBar1);
fileMenu.add(saveMenu);
fileMenu.add(outputValues);
fileMenu.add(print);
viewMenu.add(associateViewsMenu);
}
- protected void resetButton_actionPerformed(ActionEvent e)
+ protected void resetButton_actionPerformed()
{
- // TODO Auto-generated method stub
-
}
- protected void protSetting_actionPerfomed(ActionEvent arg0)
+ protected void outputPoints_actionPerformed()
{
- // TODO Auto-generated method stub
-
}
- protected void nuclSetting_actionPerfomed(ActionEvent arg0)
+ protected void outputProjPoints_actionPerformed()
{
- // TODO Auto-generated method stub
-
}
- protected void outputPoints_actionPerformed(ActionEvent e)
+ public void makePCAImage(TYPE imageType)
{
- // TODO Auto-generated method stub
-
}
- protected void outputProjPoints_actionPerformed(ActionEvent e)
+ protected void outputValues_actionPerformed()
{
- // TODO Auto-generated method stub
-
}
- protected void xCombobox_actionPerformed(ActionEvent e)
+ protected void print_actionPerformed()
{
}
- protected void yCombobox_actionPerformed(ActionEvent e)
+ protected void showLabels_actionPerformed()
{
}
- protected void zCombobox_actionPerformed(ActionEvent e)
+ protected void bgcolour_actionPerformed()
{
}
- public void eps_actionPerformed(ActionEvent e)
+ protected void originalSeqData_actionPerformed()
{
-
}
- public void png_actionPerformed(ActionEvent e)
+ protected void viewMenu_menuSelected()
{
-
}
- public void outputValues_actionPerformed(ActionEvent e)
+ protected void doDimensionChange()
{
-
- }
-
- public void print_actionPerformed(ActionEvent e)
- {
-
- }
-
- public void showLabels_actionPerformed(ActionEvent e)
- {
-
- }
-
- public void bgcolour_actionPerformed(ActionEvent e)
- {
-
- }
-
- public void originalSeqData_actionPerformed(ActionEvent e)
- {
-
- }
-
- public void viewMenu_menuSelected()
- {
-
- }
-
- protected void jvVersionSetting_actionPerfomed(ActionEvent arg0)
- {
- // TODO Auto-generated method stub
-
}
}
git://source.jalview.org / jalview.git / blobdiff