-/*\r
- * Jalview - A Sequence Alignment Editor and Viewer\r
- * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
- *\r
- * This program is free software; you can redistribute it and/or\r
- * modify it under the terms of the GNU General Public License\r
- * as published by the Free Software Foundation; either version 2\r
- * of the License, or (at your option) any later version.\r
- *\r
- * This program is distributed in the hope that it will be useful,\r
- * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
- * GNU General Public License for more details.\r
- *\r
- * You should have received a copy of the GNU General Public License\r
- * along with this program; if not, write to the Free Software\r
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
- */\r
-package jalview.jbgui;\r
-\r
-import java.awt.*;\r
-import java.awt.event.*;\r
-import javax.swing.*;\r
-\r
-public class GPCAPanel\r
- extends JInternalFrame\r
-{\r
- JPanel jPanel2 = new JPanel();\r
- JLabel jLabel1 = new JLabel();\r
- JLabel jLabel2 = new JLabel();\r
- JLabel jLabel3 = new JLabel();\r
- protected JComboBox xCombobox = new JComboBox();\r
- protected JComboBox yCombobox = new JComboBox();\r
- protected JComboBox zCombobox = new JComboBox();\r
- FlowLayout flowLayout1 = new FlowLayout();\r
- BorderLayout borderLayout1 = new BorderLayout();\r
- JMenuBar jMenuBar1 = new JMenuBar();\r
- JMenu fileMenu = new JMenu();\r
- JMenu saveMenu = new JMenu();\r
- JMenuItem eps = new JMenuItem();\r
- JMenuItem png = new JMenuItem();\r
- JMenuItem print = new JMenuItem();\r
- JMenuItem outputValues = new JMenuItem();\r
- JMenu viewMenu = new JMenu();\r
- protected JCheckBoxMenuItem showLabels = new JCheckBoxMenuItem();\r
- JMenuItem bgcolour = new JMenuItem();\r
- JMenuItem originalSeqData = new JMenuItem();\r
-\r
- public GPCAPanel()\r
- {\r
- try\r
- {\r
- jbInit();\r
- }\r
- catch (Exception e)\r
- {\r
- e.printStackTrace();\r
- }\r
-\r
- for (int i = 1; i < 8; i++)\r
- {\r
- xCombobox.addItem("dim " + i);\r
- yCombobox.addItem("dim " + i);\r
- zCombobox.addItem("dim " + i);\r
- }\r
-\r
-\r
- setJMenuBar(jMenuBar1);\r
- }\r
-\r
- private void jbInit()\r
- throws Exception\r
- {\r
- this.getContentPane().setLayout(borderLayout1);\r
- jPanel2.setLayout(flowLayout1);\r
- jLabel1.setFont(new java.awt.Font("Verdana", 0, 12));\r
- jLabel1.setText("x=");\r
- jLabel2.setFont(new java.awt.Font("Verdana", 0, 12));\r
- jLabel2.setText("y=");\r
- jLabel3.setFont(new java.awt.Font("Verdana", 0, 12));\r
- jLabel3.setText("z=");\r
- jPanel2.setBackground(Color.white);\r
- jPanel2.setBorder(null);\r
- zCombobox.setFont(new java.awt.Font("Verdana", 0, 12));\r
- zCombobox.addActionListener(new java.awt.event.ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- zCombobox_actionPerformed(e);\r
- }\r
- });\r
- yCombobox.setFont(new java.awt.Font("Verdana", 0, 12));\r
- yCombobox.addActionListener(new java.awt.event.ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- yCombobox_actionPerformed(e);\r
- }\r
- });\r
- xCombobox.setFont(new java.awt.Font("Verdana", 0, 12));\r
- xCombobox.addActionListener(new java.awt.event.ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- xCombobox_actionPerformed(e);\r
- }\r
- });\r
- fileMenu.setText("File");\r
- saveMenu.setText("Save as");\r
- eps.setText("EPS");\r
- eps.addActionListener(new ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- eps_actionPerformed(e);\r
- }\r
- });\r
- png.setText("PNG");\r
- png.addActionListener(new ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- png_actionPerformed(e);\r
- }\r
- });\r
- outputValues.setText("Output Values...");\r
- outputValues.addActionListener(new ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- outputValues_actionPerformed(e);\r
- }\r
- });\r
- print.addActionListener(new ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- print_actionPerformed(e);\r
- }\r
- });\r
- viewMenu.setText("View");\r
- showLabels.setText("Show Labels");\r
- showLabels.addActionListener(new ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- showLabels_actionPerformed(e);\r
- }\r
- });\r
- print.setText("Print");\r
- bgcolour.setText("Background Colour...");\r
- bgcolour.addActionListener(new ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- bgcolour_actionPerformed(e);\r
- }\r
- });\r
- originalSeqData.setText("PCA was made from this...");\r
- originalSeqData.addActionListener(new ActionListener()\r
- {\r
- public void actionPerformed(ActionEvent e)\r
- {\r
- originalSeqData_actionPerformed(e);\r
- }\r
- });\r
- this.getContentPane().add(jPanel2, BorderLayout.SOUTH);\r
- jPanel2.add(jLabel1, null);\r
- jPanel2.add(xCombobox, null);\r
- jPanel2.add(jLabel2, null);\r
- jPanel2.add(yCombobox, null);\r
- jPanel2.add(jLabel3, null);\r
- jPanel2.add(zCombobox, null);\r
- jMenuBar1.add(fileMenu);\r
- jMenuBar1.add(viewMenu);\r
- fileMenu.add(saveMenu);\r
- fileMenu.add(outputValues);\r
- fileMenu.add(print);\r
- fileMenu.add(originalSeqData);\r
- saveMenu.add(eps);\r
- saveMenu.add(png);\r
- viewMenu.add(showLabels);\r
- viewMenu.add(bgcolour);\r
- }\r
-\r
- protected void xCombobox_actionPerformed(ActionEvent e)\r
- {\r
- }\r
-\r
- protected void yCombobox_actionPerformed(ActionEvent e)\r
- {\r
- }\r
-\r
- protected void zCombobox_actionPerformed(ActionEvent e)\r
- {\r
- }\r
-\r
- public void eps_actionPerformed(ActionEvent e)\r
- {\r
-\r
- }\r
-\r
- public void png_actionPerformed(ActionEvent e)\r
- {\r
-\r
- }\r
-\r
- public void outputValues_actionPerformed(ActionEvent e)\r
- {\r
-\r
- }\r
-\r
- public void print_actionPerformed(ActionEvent e)\r
- {\r
-\r
- }\r
-\r
- public void showLabels_actionPerformed(ActionEvent e)\r
- {\r
-\r
- }\r
-\r
- public void bgcolour_actionPerformed(ActionEvent e)\r
- {\r
-\r
- }\r
-\r
- public void originalSeqData_actionPerformed(ActionEvent e)\r
- {\r
-\r
- }\r
-}\r
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ */
+package jalview.jbgui;
+
+import java.awt.*;
+import java.awt.event.*;
+
+import javax.swing.*;
+import javax.swing.event.*;
+
+public class GPCAPanel extends JInternalFrame
+{
+ JPanel jPanel2 = new JPanel();
+
+ JLabel jLabel1 = new JLabel();
+
+ JLabel jLabel2 = new JLabel();
+
+ JLabel jLabel3 = new JLabel();
+
+ protected JComboBox xCombobox = new JComboBox();
+
+ protected JComboBox yCombobox = new JComboBox();
+
+ protected JComboBox zCombobox = new JComboBox();
+
+ FlowLayout flowLayout1 = new FlowLayout();
+
+ BorderLayout borderLayout1 = new BorderLayout();
+
+ JMenuBar jMenuBar1 = new JMenuBar();
+
+ JMenu fileMenu = new JMenu();
+
+ JMenu saveMenu = new JMenu();
+
+ JMenuItem eps = new JMenuItem();
+
+ JMenuItem png = new JMenuItem();
+
+ JMenuItem print = new JMenuItem();
+
+ JMenuItem outputValues = new JMenuItem();
+
+ JMenuItem outputPoints = new JMenuItem();
+
+ JMenuItem outputProjPoints = new JMenuItem();
+
+ protected JMenu viewMenu = new JMenu();
+
+ protected JCheckBoxMenuItem showLabels = new JCheckBoxMenuItem();
+
+ JMenuItem bgcolour = new JMenuItem();
+
+ JMenuItem originalSeqData = new JMenuItem();
+
+ protected JMenu associateViewsMenu = new JMenu();
+
+ public GPCAPanel()
+ {
+ try
+ {
+ jbInit();
+ } catch (Exception e)
+ {
+ e.printStackTrace();
+ }
+
+ for (int i = 1; i < 8; i++)
+ {
+ xCombobox.addItem("dim " + i);
+ yCombobox.addItem("dim " + i);
+ zCombobox.addItem("dim " + i);
+ }
+
+ setJMenuBar(jMenuBar1);
+ }
+
+ private void jbInit() throws Exception
+ {
+ this.getContentPane().setLayout(borderLayout1);
+ jPanel2.setLayout(flowLayout1);
+ jLabel1.setFont(new java.awt.Font("Verdana", 0, 12));
+ jLabel1.setText("x=");
+ jLabel2.setFont(new java.awt.Font("Verdana", 0, 12));
+ jLabel2.setText("y=");
+ jLabel3.setFont(new java.awt.Font("Verdana", 0, 12));
+ jLabel3.setText("z=");
+ jPanel2.setBackground(Color.white);
+ jPanel2.setBorder(null);
+ zCombobox.setFont(new java.awt.Font("Verdana", 0, 12));
+ zCombobox.addActionListener(new java.awt.event.ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ zCombobox_actionPerformed(e);
+ }
+ });
+ yCombobox.setFont(new java.awt.Font("Verdana", 0, 12));
+ yCombobox.addActionListener(new java.awt.event.ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ yCombobox_actionPerformed(e);
+ }
+ });
+ xCombobox.setFont(new java.awt.Font("Verdana", 0, 12));
+ xCombobox.addActionListener(new java.awt.event.ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ xCombobox_actionPerformed(e);
+ }
+ });
+ fileMenu.setText("File");
+ saveMenu.setText("Save as");
+ eps.setText("EPS");
+ eps.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ eps_actionPerformed(e);
+ }
+ });
+ png.setText("PNG");
+ png.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ png_actionPerformed(e);
+ }
+ });
+ outputValues.setText("Output Values...");
+ outputValues.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ outputValues_actionPerformed(e);
+ }
+ });
+ outputPoints.setText("Output points...");
+ outputPoints.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ outputPoints_actionPerformed(e);
+ }
+ });
+ outputProjPoints.setText("Output transformed points...");
+ outputProjPoints.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ outputProjPoints_actionPerformed(e);
+ }
+ });
+ print.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ print_actionPerformed(e);
+ }
+ });
+ viewMenu.setText("View");
+ viewMenu.addMenuListener(new MenuListener()
+ {
+ public void menuSelected(MenuEvent e)
+ {
+ viewMenu_menuSelected();
+ }
+
+ public void menuDeselected(MenuEvent e)
+ {
+ }
+
+ public void menuCanceled(MenuEvent e)
+ {
+ }
+ });
+ showLabels.setText("Show Labels");
+ showLabels.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ showLabels_actionPerformed(e);
+ }
+ });
+ print.setText("Print");
+ bgcolour.setText("Background Colour...");
+ bgcolour.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ bgcolour_actionPerformed(e);
+ }
+ });
+ originalSeqData.setText("Input Data...");
+ originalSeqData.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ originalSeqData_actionPerformed(e);
+ }
+ });
+ associateViewsMenu.setText("Associate Nodes With");
+ this.getContentPane().add(jPanel2, BorderLayout.SOUTH);
+ jPanel2.add(jLabel1, null);
+ jPanel2.add(xCombobox, null);
+ jPanel2.add(jLabel2, null);
+ jPanel2.add(yCombobox, null);
+ jPanel2.add(jLabel3, null);
+ jPanel2.add(zCombobox, null);
+ jMenuBar1.add(fileMenu);
+ jMenuBar1.add(viewMenu);
+ fileMenu.add(saveMenu);
+ fileMenu.add(outputValues);
+ fileMenu.add(print);
+ fileMenu.add(originalSeqData);
+ fileMenu.add(outputPoints);
+ fileMenu.add(outputProjPoints);
+ saveMenu.add(eps);
+ saveMenu.add(png);
+ viewMenu.add(showLabels);
+ viewMenu.add(bgcolour);
+ viewMenu.add(associateViewsMenu);
+ }
+
+ protected void outputPoints_actionPerformed(ActionEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void outputProjPoints_actionPerformed(ActionEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void xCombobox_actionPerformed(ActionEvent e)
+ {
+ }
+
+ protected void yCombobox_actionPerformed(ActionEvent e)
+ {
+ }
+
+ protected void zCombobox_actionPerformed(ActionEvent e)
+ {
+ }
+
+ public void eps_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void png_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void outputValues_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void print_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void showLabels_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void bgcolour_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void originalSeqData_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void viewMenu_menuSelected()
+ {
+
+ }
+}
git://source.jalview.org / jalview.git / blobdiff