Formatting
[jalview.git] / src / jalview / schemabinding / version2 / JGroupDescriptor.java
index 1985c61..15aeb79 100755 (executable)
@@ -1,5 +1,5 @@
 /*\r
- * This class was automatically generated with \r
+ * This class was automatically generated with\r
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
  * Schema.\r
  * $Id$\r
 \r
 package jalview.schemabinding.version2;\r
 \r
-  //---------------------------------/\r
- //- Imported classes and packages -/\r
+//---------------------------------/\r
+//- Imported classes and packages -/\r
 //---------------------------------/\r
 \r
-import org.exolab.castor.mapping.AccessMode;\r
-import org.exolab.castor.xml.TypeValidator;\r
-import org.exolab.castor.xml.XMLFieldDescriptor;\r
 import org.exolab.castor.xml.validators.*;\r
 \r
 /**\r
  * Class JGroupDescriptor.\r
- * \r
+ *\r
  * @version $Revision$ $Date$\r
  */\r
-public class JGroupDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {\r
-\r
-\r
-      //--------------------------/\r
-     //- Class/Member Variables -/\r
-    //--------------------------/\r
-\r
-    /**\r
-     * Field nsPrefix\r
-     */\r
-    private java.lang.String nsPrefix;\r
-\r
-    /**\r
-     * Field nsURI\r
-     */\r
-    private java.lang.String nsURI;\r
-\r
-    /**\r
-     * Field xmlName\r
-     */\r
-    private java.lang.String xmlName;\r
-\r
-    /**\r
-     * Field identity\r
-     */\r
-    private org.exolab.castor.xml.XMLFieldDescriptor identity;\r
-\r
-\r
-      //----------------/\r
-     //- Constructors -/\r
-    //----------------/\r
-\r
-    public JGroupDescriptor() {\r
-        super();\r
-        nsURI = "www.jalview.org";\r
-        xmlName = "JGroup";\r
-        \r
-        //-- set grouping compositor\r
-        setCompositorAsSequence();\r
-        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;\r
-        org.exolab.castor.xml.XMLFieldHandler              handler        = null;\r
-        org.exolab.castor.xml.FieldValidator               fieldValidator = null;\r
-        //-- initialize attribute descriptors\r
-        \r
-        //-- _start\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_start", "start", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasStart())\r
-                    return null;\r
-                return new java.lang.Integer(target.getStart());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteStart();\r
-                        return;\r
-                    }\r
-                    target.setStart( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _start\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _end\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasEnd())\r
-                    return null;\r
-                return new java.lang.Integer(target.getEnd());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteEnd();\r
-                        return;\r
-                    }\r
-                    target.setEnd( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _end\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _name\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_name", "name", org.exolab.castor.xml.NodeType.Attribute);\r
-        desc.setImmutable(true);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                return target.getName();\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    target.setName( (java.lang.String) value);\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _name\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            StringValidator typeValidator = new StringValidator();\r
-            typeValidator.setWhiteSpace("preserve");\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _colour\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_colour", "colour", org.exolab.castor.xml.NodeType.Attribute);\r
-        desc.setImmutable(true);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                return target.getColour();\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    target.setColour( (java.lang.String) value);\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _colour\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            StringValidator typeValidator = new StringValidator();\r
-            typeValidator.setWhiteSpace("preserve");\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _consThreshold\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_consThreshold", "consThreshold", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasConsThreshold())\r
-                    return null;\r
-                return new java.lang.Integer(target.getConsThreshold());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteConsThreshold();\r
-                        return;\r
-                    }\r
-                    target.setConsThreshold( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _consThreshold\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _pidThreshold\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_pidThreshold", "pidThreshold", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasPidThreshold())\r
-                    return null;\r
-                return new java.lang.Integer(target.getPidThreshold());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deletePidThreshold();\r
-                        return;\r
-                    }\r
-                    target.setPidThreshold( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _pidThreshold\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _outlineColour\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_outlineColour", "outlineColour", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasOutlineColour())\r
-                    return null;\r
-                return new java.lang.Integer(target.getOutlineColour());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteOutlineColour();\r
-                        return;\r
-                    }\r
-                    target.setOutlineColour( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _outlineColour\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _displayBoxes\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_displayBoxes", "displayBoxes", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasDisplayBoxes())\r
-                    return null;\r
-                return (target.getDisplayBoxes() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteDisplayBoxes();\r
-                        return;\r
-                    }\r
-                    target.setDisplayBoxes( ((java.lang.Boolean)value).booleanValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _displayBoxes\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            BooleanValidator typeValidator = new BooleanValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _displayText\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_displayText", "displayText", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasDisplayText())\r
-                    return null;\r
-                return (target.getDisplayText() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteDisplayText();\r
-                        return;\r
-                    }\r
-                    target.setDisplayText( ((java.lang.Boolean)value).booleanValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _displayText\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            BooleanValidator typeValidator = new BooleanValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _colourText\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_colourText", "colourText", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasColourText())\r
-                    return null;\r
-                return (target.getColourText() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteColourText();\r
-                        return;\r
-                    }\r
-                    target.setColourText( ((java.lang.Boolean)value).booleanValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _colourText\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            BooleanValidator typeValidator = new BooleanValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _textCol1\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_textCol1", "textCol1", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasTextCol1())\r
-                    return null;\r
-                return new java.lang.Integer(target.getTextCol1());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteTextCol1();\r
-                        return;\r
-                    }\r
-                    target.setTextCol1( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _textCol1\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _textCol2\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_textCol2", "textCol2", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasTextCol2())\r
-                    return null;\r
-                return new java.lang.Integer(target.getTextCol2());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteTextCol2();\r
-                        return;\r
-                    }\r
-                    target.setTextCol2( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _textCol2\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _textColThreshold\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_textColThreshold", "textColThreshold", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                if(!target.hasTextColThreshold())\r
-                    return null;\r
-                return new java.lang.Integer(target.getTextColThreshold());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteTextColThreshold();\r
-                        return;\r
-                    }\r
-                    target.setTextColThreshold( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _textColThreshold\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- initialize element descriptors\r
-        \r
-        //-- _seqList\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_seqList", "seq", org.exolab.castor.xml.NodeType.Element);\r
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                JGroup target = (JGroup) object;\r
-                return target.getSeq();\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    JGroup target = (JGroup) object;\r
-                    // ignore null values for non optional primitives\r
-                    if (value == null) return;\r
-                    \r
-                    target.addSeq( ((java.lang.Integer)value).intValue());\r
-                }\r
-                catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance( java.lang.Object parent ) {\r
-                return null;\r
-            }\r
-        } );\r
-        desc.setHandler(handler);\r
-        desc.setNameSpaceURI("www.jalview.org");\r
-        desc.setRequired(true);\r
-        desc.setMultivalued(true);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _seqList\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        fieldValidator.setMinOccurs(1);\r
-        { //-- local scope\r
-            IntegerValidator typeValidator= new IntegerValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-    } //-- jalview.schemabinding.version2.JGroupDescriptor()\r
-\r
-\r
-      //-----------/\r
-     //- Methods -/\r
-    //-----------/\r
-\r
-    /**\r
-     * Method getAccessMode\r
-     * \r
-     * \r
-     * \r
-     * @return AccessMode\r
-     */\r
-    public org.exolab.castor.mapping.AccessMode getAccessMode()\r
+public class JGroupDescriptor\r
+    extends org.exolab.castor.xml.util.XMLClassDescriptorImpl\r
+{\r
+\r
+  //--------------------------/\r
+  //- Class/Member Variables -/\r
+  //--------------------------/\r
+\r
+  /**\r
+   * Field nsPrefix\r
+   */\r
+  private java.lang.String nsPrefix;\r
+\r
+  /**\r
+   * Field nsURI\r
+   */\r
+  private java.lang.String nsURI;\r
+\r
+  /**\r
+   * Field xmlName\r
+   */\r
+  private java.lang.String xmlName;\r
+\r
+  /**\r
+   * Field identity\r
+   */\r
+  private org.exolab.castor.xml.XMLFieldDescriptor identity;\r
+\r
+  //----------------/\r
+  //- Constructors -/\r
+  //----------------/\r
+\r
+  public JGroupDescriptor()\r
+  {\r
+    super();\r
+    nsURI = "www.jalview.org";\r
+    xmlName = "JGroup";\r
+\r
+    //-- set grouping compositor\r
+    setCompositorAsSequence();\r
+    org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;\r
+    org.exolab.castor.xml.XMLFieldHandler handler = null;\r
+    org.exolab.castor.xml.FieldValidator fieldValidator = null;\r
+    //-- initialize attribute descriptors\r
+\r
+    //-- _start\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_start", "start",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasStart())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getStart());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteStart();\r
+            return;\r
+          }\r
+          target.setStart( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _start\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _end\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasEnd())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getEnd());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteEnd();\r
+            return;\r
+          }\r
+          target.setEnd( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _end\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _name\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        String.class, "_name", "name", org.exolab.castor.xml.NodeType.Attribute);\r
+    desc.setImmutable(true);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        return target.getName();\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          target.setName( (java.lang.String) value);\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _name\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      StringValidator typeValidator = new StringValidator();\r
+      typeValidator.setWhiteSpace("preserve");\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _colour\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        String.class, "_colour", "colour",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    desc.setImmutable(true);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        return target.getColour();\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          target.setColour( (java.lang.String) value);\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _colour\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      StringValidator typeValidator = new StringValidator();\r
+      typeValidator.setWhiteSpace("preserve");\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _consThreshold\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_consThreshold", "consThreshold",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasConsThreshold())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getConsThreshold());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteConsThreshold();\r
+            return;\r
+          }\r
+          target.setConsThreshold( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _consThreshold\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _pidThreshold\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_pidThreshold", "pidThreshold",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasPidThreshold())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getPidThreshold());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deletePidThreshold();\r
+            return;\r
+          }\r
+          target.setPidThreshold( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _pidThreshold\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _outlineColour\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_outlineColour", "outlineColour",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasOutlineColour())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getOutlineColour());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteOutlineColour();\r
+            return;\r
+          }\r
+          target.setOutlineColour( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
         return null;\r
-    } //-- org.exolab.castor.mapping.AccessMode getAccessMode() \r
-\r
-    /**\r
-     * Method getExtends\r
-     * \r
-     * \r
-     * \r
-     * @return ClassDescriptor\r
-     */\r
-    public org.exolab.castor.mapping.ClassDescriptor getExtends()\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _outlineColour\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _displayBoxes\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Boolean.TYPE, "_displayBoxes", "displayBoxes",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasDisplayBoxes())\r
+        {\r
+          return null;\r
+        }\r
+        return (target.getDisplayBoxes() ? java.lang.Boolean.TRUE :\r
+                java.lang.Boolean.FALSE);\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteDisplayBoxes();\r
+            return;\r
+          }\r
+          target.setDisplayBoxes( ( (java.lang.Boolean) value).booleanValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
         return null;\r
-    } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() \r
-\r
-    /**\r
-     * Method getIdentity\r
-     * \r
-     * \r
-     * \r
-     * @return FieldDescriptor\r
-     */\r
-    public org.exolab.castor.mapping.FieldDescriptor getIdentity()\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _displayBoxes\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      BooleanValidator typeValidator = new BooleanValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _displayText\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Boolean.TYPE, "_displayText", "displayText",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
-        return identity;\r
-    } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() \r
-\r
-    /**\r
-     * Method getJavaClass\r
-     * \r
-     * \r
-     * \r
-     * @return Class\r
-     */\r
-    public java.lang.Class getJavaClass()\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasDisplayText())\r
+        {\r
+          return null;\r
+        }\r
+        return (target.getDisplayText() ? java.lang.Boolean.TRUE :\r
+                java.lang.Boolean.FALSE);\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteDisplayText();\r
+            return;\r
+          }\r
+          target.setDisplayText( ( (java.lang.Boolean) value).booleanValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _displayText\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      BooleanValidator typeValidator = new BooleanValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _colourText\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Boolean.TYPE, "_colourText", "colourText",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
-        return jalview.schemabinding.version2.JGroup.class;\r
-    } //-- java.lang.Class getJavaClass() \r
-\r
-    /**\r
-     * Method getNameSpacePrefix\r
-     * \r
-     * \r
-     * \r
-     * @return String\r
-     */\r
-    public java.lang.String getNameSpacePrefix()\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasColourText())\r
+        {\r
+          return null;\r
+        }\r
+        return (target.getColourText() ? java.lang.Boolean.TRUE :\r
+                java.lang.Boolean.FALSE);\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteColourText();\r
+            return;\r
+          }\r
+          target.setColourText( ( (java.lang.Boolean) value).booleanValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _colourText\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      BooleanValidator typeValidator = new BooleanValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _textCol1\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_textCol1", "textCol1",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
-        return nsPrefix;\r
-    } //-- java.lang.String getNameSpacePrefix() \r
-\r
-    /**\r
-     * Method getNameSpaceURI\r
-     * \r
-     * \r
-     * \r
-     * @return String\r
-     */\r
-    public java.lang.String getNameSpaceURI()\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasTextCol1())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getTextCol1());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteTextCol1();\r
+            return;\r
+          }\r
+          target.setTextCol1( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _textCol1\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _textCol2\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_textCol2", "textCol2",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
-        return nsURI;\r
-    } //-- java.lang.String getNameSpaceURI() \r
-\r
-    /**\r
-     * Method getValidator\r
-     * \r
-     * \r
-     * \r
-     * @return TypeValidator\r
-     */\r
-    public org.exolab.castor.xml.TypeValidator getValidator()\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasTextCol2())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getTextCol2());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteTextCol2();\r
+            return;\r
+          }\r
+          target.setTextCol2( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _textCol2\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- _textColThreshold\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_textColThreshold", "textColThreshold",\r
+        org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
-        return this;\r
-    } //-- org.exolab.castor.xml.TypeValidator getValidator() \r
-\r
-    /**\r
-     * Method getXMLName\r
-     * \r
-     * \r
-     * \r
-     * @return String\r
-     */\r
-    public java.lang.String getXMLName()\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        if (!target.hasTextColThreshold())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getTextColThreshold());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteTextColThreshold();\r
+            return;\r
+          }\r
+          target.setTextColThreshold( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _textColThreshold\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    //-- initialize element descriptors\r
+\r
+    //-- _seqList\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.\r
+        Integer.TYPE, "_seqList", "seq", org.exolab.castor.xml.NodeType.Element);\r
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()\r
     {\r
-        return xmlName;\r
-    } //-- java.lang.String getXMLName() \r
+      public java.lang.Object getValue(java.lang.Object object)\r
+          throws IllegalStateException\r
+      {\r
+        JGroup target = (JGroup) object;\r
+        return target.getSeq();\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+          throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          JGroup target = (JGroup) object;\r
+          // ignore null values for non optional primitives\r
+          if (value == null)\r
+          {\r
+            return;\r
+          }\r
+\r
+          target.addSeq( ( (java.lang.Integer) value).intValue());\r
+        }\r
+        catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    });\r
+    desc.setHandler(handler);\r
+    desc.setNameSpaceURI("www.jalview.org");\r
+    desc.setRequired(true);\r
+    desc.setMultivalued(true);\r
+    addFieldDescriptor(desc);\r
+\r
+    //-- validation code for: _seqList\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    fieldValidator.setMinOccurs(1);\r
+    { //-- local scope\r
+      IntegerValidator typeValidator = new IntegerValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+  } //-- jalview.schemabinding.version2.JGroupDescriptor()\r
+\r
+  //-----------/\r
+  //- Methods -/\r
+  //-----------/\r
+\r
+  /**\r
+   * Method getAccessMode\r
+   *\r
+   *\r
+   *\r
+   * @return AccessMode\r
+   */\r
+  public org.exolab.castor.mapping.AccessMode getAccessMode()\r
+  {\r
+    return null;\r
+  } //-- org.exolab.castor.mapping.AccessMode getAccessMode()\r
+\r
+  /**\r
+   * Method getExtends\r
+   *\r
+   *\r
+   *\r
+   * @return ClassDescriptor\r
+   */\r
+  public org.exolab.castor.mapping.ClassDescriptor getExtends()\r
+  {\r
+    return null;\r
+  } //-- org.exolab.castor.mapping.ClassDescriptor getExtends()\r
+\r
+  /**\r
+   * Method getIdentity\r
+   *\r
+   *\r
+   *\r
+   * @return FieldDescriptor\r
+   */\r
+  public org.exolab.castor.mapping.FieldDescriptor getIdentity()\r
+  {\r
+    return identity;\r
+  } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity()\r
+\r
+  /**\r
+   * Method getJavaClass\r
+   *\r
+   *\r
+   *\r
+   * @return Class\r
+   */\r
+  public java.lang.Class getJavaClass()\r
+  {\r
+    return jalview.schemabinding.version2.JGroup.class;\r
+  } //-- java.lang.Class getJavaClass()\r
+\r
+  /**\r
+   * Method getNameSpacePrefix\r
+   *\r
+   *\r
+   *\r
+   * @return String\r
+   */\r
+  public java.lang.String getNameSpacePrefix()\r
+  {\r
+    return nsPrefix;\r
+  } //-- java.lang.String getNameSpacePrefix()\r
+\r
+  /**\r
+   * Method getNameSpaceURI\r
+   *\r
+   *\r
+   *\r
+   * @return String\r
+   */\r
+  public java.lang.String getNameSpaceURI()\r
+  {\r
+    return nsURI;\r
+  } //-- java.lang.String getNameSpaceURI()\r
+\r
+  /**\r
+   * Method getValidator\r
+   *\r
+   *\r
+   *\r
+   * @return TypeValidator\r
+   */\r
+  public org.exolab.castor.xml.TypeValidator getValidator()\r
+  {\r
+    return this;\r
+  } //-- org.exolab.castor.xml.TypeValidator getValidator()\r
+\r
+  /**\r
+   * Method getXMLName\r
+   *\r
+   *\r
+   *\r
+   * @return String\r
+   */\r
+  public java.lang.String getXMLName()\r
+  {\r
+    return xmlName;\r
+  } //-- java.lang.String getXMLName()\r
 \r
 }\r