merge from 2_4_Release branch
[jalview.git] / src / jalview / schemabinding / version2 / descriptors / AnnotationColoursDescriptor.java
index 3d32ff6..4e606ed 100644 (file)
@@ -1,15 +1,26 @@
 /*\r
- * This class was automatically generated with \r
- * <a href="http://www.castor.org">Castor 1.1</a>, using an XML\r
- * Schema.\r
- * $Id$\r
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)\r
+ * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * \r
+ * This program is free software; you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License\r
+ * as published by the Free Software Foundation; either version 2\r
+ * of the License, or (at your option) any later version.\r
+ * \r
+ * This program is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
+ * GNU General Public License for more details.\r
+ * \r
+ * You should have received a copy of the GNU General Public License\r
+ * along with this program; if not, write to the Free Software\r
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
  */\r
-\r
 package jalview.schemabinding.version2.descriptors;\r
 \r
-  //---------------------------------/\r
- //- Imported classes and packages -/\r
-//---------------------------------/\r
+// ---------------------------------/\r
+// - Imported classes and packages -/\r
+// ---------------------------------/\r
 \r
 import jalview.schemabinding.version2.AnnotationColours;\r
 \r
@@ -18,386 +29,447 @@ import jalview.schemabinding.version2.AnnotationColours;
  * \r
  * @version $Revision$ $Date$\r
  */\r
-public class AnnotationColoursDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {\r
-\r
-\r
-      //--------------------------/\r
-     //- Class/Member Variables -/\r
-    //--------------------------/\r
-\r
-    /**\r
-     * Field _elementDefinition.\r
-     */\r
-    private boolean _elementDefinition;\r
-\r
-    /**\r
-     * Field _nsPrefix.\r
-     */\r
-    private java.lang.String _nsPrefix;\r
-\r
-    /**\r
-     * Field _nsURI.\r
-     */\r
-    private java.lang.String _nsURI;\r
-\r
-    /**\r
-     * Field _xmlName.\r
-     */\r
-    private java.lang.String _xmlName;\r
-\r
-\r
-      //----------------/\r
-     //- Constructors -/\r
-    //----------------/\r
-\r
-    public AnnotationColoursDescriptor() {\r
-        super();\r
-        _nsURI = "www.jalview.org";\r
-        _xmlName = "AnnotationColours";\r
-        _elementDefinition = true;\r
-        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;\r
-        org.exolab.castor.mapping.FieldHandler             handler        = null;\r
-        org.exolab.castor.xml.FieldValidator               fieldValidator = null;\r
-        //-- initialize attribute descriptors\r
-        \r
-        //-- _aboveThreshold\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_aboveThreshold", "aboveThreshold", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                AnnotationColours target = (AnnotationColours) object;\r
-                if (!target.hasAboveThreshold()) { return null; }\r
-                return new java.lang.Integer(target.getAboveThreshold());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    AnnotationColours target = (AnnotationColours) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteAboveThreshold();\r
-                        return;\r
-                    }\r
-                    target.setAboveThreshold( ((java.lang.Integer) value).intValue());\r
-                } catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance(java.lang.Object parent) {\r
-                return null;\r
-            }\r
-        };\r
-        desc.setHandler(handler);\r
-        desc.setMultivalued(false);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _aboveThreshold\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            org.exolab.castor.xml.validators.IntValidator typeValidator;\r
-            typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-            typeValidator.setMinInclusive(-2147483648);\r
-            typeValidator.setMaxInclusive(2147483647);\r
-        }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _annotation\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_annotation", "annotation", org.exolab.castor.xml.NodeType.Attribute);\r
-        desc.setImmutable(true);\r
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                AnnotationColours target = (AnnotationColours) object;\r
-                return target.getAnnotation();\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    AnnotationColours target = (AnnotationColours) object;\r
-                    target.setAnnotation( (java.lang.String) value);\r
-                } catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance(java.lang.Object parent) {\r
-                return null;\r
-            }\r
-        };\r
-        desc.setHandler(handler);\r
-        desc.setMultivalued(false);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _annotation\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            org.exolab.castor.xml.validators.StringValidator typeValidator;\r
-            typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-            typeValidator.setWhiteSpace("preserve");\r
+public class AnnotationColoursDescriptor extends\r
+        org.exolab.castor.xml.util.XMLClassDescriptorImpl\r
+{\r
+\r
+  // --------------------------/\r
+  // - Class/Member Variables -/\r
+  // --------------------------/\r
+\r
+  /**\r
+   * Field _elementDefinition.\r
+   */\r
+  private boolean _elementDefinition;\r
+\r
+  /**\r
+   * Field _nsPrefix.\r
+   */\r
+  private java.lang.String _nsPrefix;\r
+\r
+  /**\r
+   * Field _nsURI.\r
+   */\r
+  private java.lang.String _nsURI;\r
+\r
+  /**\r
+   * Field _xmlName.\r
+   */\r
+  private java.lang.String _xmlName;\r
+\r
+  // ----------------/\r
+  // - Constructors -/\r
+  // ----------------/\r
+\r
+  public AnnotationColoursDescriptor()\r
+  {\r
+    super();\r
+    _nsURI = "www.jalview.org";\r
+    _xmlName = "AnnotationColours";\r
+    _elementDefinition = true;\r
+    org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;\r
+    org.exolab.castor.mapping.FieldHandler handler = null;\r
+    org.exolab.castor.xml.FieldValidator fieldValidator = null;\r
+    // -- initialize attribute descriptors\r
+\r
+    // -- _aboveThreshold\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
+            java.lang.Integer.TYPE, "_aboveThreshold", "aboveThreshold",\r
+            org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+              throws IllegalStateException\r
+      {\r
+        AnnotationColours target = (AnnotationColours) object;\r
+        if (!target.hasAboveThreshold())\r
+        {\r
+          return null;\r
         }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _minColour\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_minColour", "minColour", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                AnnotationColours target = (AnnotationColours) object;\r
-                if (!target.hasMinColour()) { return null; }\r
-                return new java.lang.Integer(target.getMinColour());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    AnnotationColours target = (AnnotationColours) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteMinColour();\r
-                        return;\r
-                    }\r
-                    target.setMinColour( ((java.lang.Integer) value).intValue());\r
-                } catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance(java.lang.Object parent) {\r
-                return null;\r
-            }\r
-        };\r
-        desc.setHandler(handler);\r
-        desc.setMultivalued(false);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _minColour\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            org.exolab.castor.xml.validators.IntValidator typeValidator;\r
-            typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-            typeValidator.setMinInclusive(-2147483648);\r
-            typeValidator.setMaxInclusive(2147483647);\r
+        return new java.lang.Integer(target.getAboveThreshold());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+              throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          AnnotationColours target = (AnnotationColours) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteAboveThreshold();\r
+            return;\r
+          }\r
+          target.setAboveThreshold(((java.lang.Integer) value).intValue());\r
+        } catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
         }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _maxColour\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_maxColour", "maxColour", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                AnnotationColours target = (AnnotationColours) object;\r
-                if (!target.hasMaxColour()) { return null; }\r
-                return new java.lang.Integer(target.getMaxColour());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    AnnotationColours target = (AnnotationColours) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteMaxColour();\r
-                        return;\r
-                    }\r
-                    target.setMaxColour( ((java.lang.Integer) value).intValue());\r
-                } catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance(java.lang.Object parent) {\r
-                return null;\r
-            }\r
-        };\r
-        desc.setHandler(handler);\r
-        desc.setMultivalued(false);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _maxColour\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            org.exolab.castor.xml.validators.IntValidator typeValidator;\r
-            typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-            typeValidator.setMinInclusive(-2147483648);\r
-            typeValidator.setMaxInclusive(2147483647);\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    };\r
+    desc.setHandler(handler);\r
+    desc.setMultivalued(false);\r
+    addFieldDescriptor(desc);\r
+\r
+    // -- validation code for: _aboveThreshold\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { // -- local scope\r
+      org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+      typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+      typeValidator.setMinInclusive(-2147483648);\r
+      typeValidator.setMaxInclusive(2147483647);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    // -- _annotation\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
+            java.lang.String.class, "_annotation", "annotation",\r
+            org.exolab.castor.xml.NodeType.Attribute);\r
+    desc.setImmutable(true);\r
+    handler = new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+              throws IllegalStateException\r
+      {\r
+        AnnotationColours target = (AnnotationColours) object;\r
+        return target.getAnnotation();\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+              throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          AnnotationColours target = (AnnotationColours) object;\r
+          target.setAnnotation((java.lang.String) value);\r
+        } catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
         }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _colourScheme\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_colourScheme", "colourScheme", org.exolab.castor.xml.NodeType.Attribute);\r
-        desc.setImmutable(true);\r
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                AnnotationColours target = (AnnotationColours) object;\r
-                return target.getColourScheme();\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    AnnotationColours target = (AnnotationColours) object;\r
-                    target.setColourScheme( (java.lang.String) value);\r
-                } catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance(java.lang.Object parent) {\r
-                return null;\r
-            }\r
-        };\r
-        desc.setHandler(handler);\r
-        desc.setMultivalued(false);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _colourScheme\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            org.exolab.castor.xml.validators.StringValidator typeValidator;\r
-            typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-            typeValidator.setWhiteSpace("preserve");\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    };\r
+    desc.setHandler(handler);\r
+    desc.setMultivalued(false);\r
+    addFieldDescriptor(desc);\r
+\r
+    // -- validation code for: _annotation\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { // -- local scope\r
+      org.exolab.castor.xml.validators.StringValidator typeValidator;\r
+      typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+      typeValidator.setWhiteSpace("preserve");\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    // -- _minColour\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
+            java.lang.Integer.TYPE, "_minColour", "minColour",\r
+            org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+              throws IllegalStateException\r
+      {\r
+        AnnotationColours target = (AnnotationColours) object;\r
+        if (!target.hasMinColour())\r
+        {\r
+          return null;\r
         }\r
-        desc.setValidator(fieldValidator);\r
-        //-- _threshold\r
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Float.TYPE, "_threshold", "threshold", org.exolab.castor.xml.NodeType.Attribute);\r
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
-            public java.lang.Object getValue( java.lang.Object object ) \r
-                throws IllegalStateException\r
-            {\r
-                AnnotationColours target = (AnnotationColours) object;\r
-                if (!target.hasThreshold()) { return null; }\r
-                return new java.lang.Float(target.getThreshold());\r
-            }\r
-            public void setValue( java.lang.Object object, java.lang.Object value) \r
-                throws IllegalStateException, IllegalArgumentException\r
-            {\r
-                try {\r
-                    AnnotationColours target = (AnnotationColours) object;\r
-                    // if null, use delete method for optional primitives \r
-                    if (value == null) {\r
-                        target.deleteThreshold();\r
-                        return;\r
-                    }\r
-                    target.setThreshold( ((java.lang.Float) value).floatValue());\r
-                } catch (java.lang.Exception ex) {\r
-                    throw new IllegalStateException(ex.toString());\r
-                }\r
-            }\r
-            public java.lang.Object newInstance(java.lang.Object parent) {\r
-                return null;\r
-            }\r
-        };\r
-        desc.setHandler(handler);\r
-        desc.setMultivalued(false);\r
-        addFieldDescriptor(desc);\r
-        \r
-        //-- validation code for: _threshold\r
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
-        { //-- local scope\r
-            org.exolab.castor.xml.validators.FloatValidator typeValidator;\r
-            typeValidator = new org.exolab.castor.xml.validators.FloatValidator();\r
-            fieldValidator.setValidator(typeValidator);\r
-            typeValidator.setMinInclusive((float) -3.4028235E38);\r
-            typeValidator.setMaxInclusive((float) 3.4028235E38);\r
+        return new java.lang.Integer(target.getMinColour());\r
+      }\r
+\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+              throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          AnnotationColours target = (AnnotationColours) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteMinColour();\r
+            return;\r
+          }\r
+          target.setMinColour(((java.lang.Integer) value).intValue());\r
+        } catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
         }\r
-        desc.setValidator(fieldValidator);\r
-        //-- initialize element descriptors\r
-        \r
-    }\r
+      }\r
 \r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    };\r
+    desc.setHandler(handler);\r
+    desc.setMultivalued(false);\r
+    addFieldDescriptor(desc);\r
 \r
-      //-----------/\r
-     //- Methods -/\r
-    //-----------/\r
+    // -- validation code for: _minColour\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { // -- local scope\r
+      org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+      typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+      typeValidator.setMinInclusive(-2147483648);\r
+      typeValidator.setMaxInclusive(2147483647);\r
+    }\r
+    desc.setValidator(fieldValidator);\r
+    // -- _maxColour\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
+            java.lang.Integer.TYPE, "_maxColour", "maxColour",\r
+            org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+              throws IllegalStateException\r
+      {\r
+        AnnotationColours target = (AnnotationColours) object;\r
+        if (!target.hasMaxColour())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Integer(target.getMaxColour());\r
+      }\r
 \r
-    /**\r
-     * Method getAccessMode.\r
-     * \r
-     * @return the access mode specified for this class.\r
-     */\r
-    public org.exolab.castor.mapping.AccessMode getAccessMode(\r
-    ) {\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+              throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          AnnotationColours target = (AnnotationColours) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteMaxColour();\r
+            return;\r
+          }\r
+          target.setMaxColour(((java.lang.Integer) value).intValue());\r
+        } catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
+\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
         return null;\r
-    }\r
+      }\r
+    };\r
+    desc.setHandler(handler);\r
+    desc.setMultivalued(false);\r
+    addFieldDescriptor(desc);\r
 \r
-    /**\r
-     * Method getIdentity.\r
-     * \r
-     * @return the identity field, null if this class has no\r
-     * identity.\r
-     */\r
-    public org.exolab.castor.mapping.FieldDescriptor getIdentity(\r
-    ) {\r
-        return super.getIdentity();\r
+    // -- validation code for: _maxColour\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { // -- local scope\r
+      org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+      typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+      typeValidator.setMinInclusive(-2147483648);\r
+      typeValidator.setMaxInclusive(2147483647);\r
     }\r
+    desc.setValidator(fieldValidator);\r
+    // -- _colourScheme\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
+            java.lang.String.class, "_colourScheme", "colourScheme",\r
+            org.exolab.castor.xml.NodeType.Attribute);\r
+    desc.setImmutable(true);\r
+    handler = new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+              throws IllegalStateException\r
+      {\r
+        AnnotationColours target = (AnnotationColours) object;\r
+        return target.getColourScheme();\r
+      }\r
 \r
-    /**\r
-     * Method getJavaClass.\r
-     * \r
-     * @return the Java class represented by this descriptor.\r
-     */\r
-    public java.lang.Class getJavaClass(\r
-    ) {\r
-        return jalview.schemabinding.version2.AnnotationColours.class;\r
-    }\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+              throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          AnnotationColours target = (AnnotationColours) object;\r
+          target.setColourScheme((java.lang.String) value);\r
+        } catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
 \r
-    /**\r
-     * Method getNameSpacePrefix.\r
-     * \r
-     * @return the namespace prefix to use when marshaling as XML.\r
-     */\r
-    public java.lang.String getNameSpacePrefix(\r
-    ) {\r
-        return _nsPrefix;\r
-    }\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    };\r
+    desc.setHandler(handler);\r
+    desc.setMultivalued(false);\r
+    addFieldDescriptor(desc);\r
 \r
-    /**\r
-     * Method getNameSpaceURI.\r
-     * \r
-     * @return the namespace URI used when marshaling and\r
-     * unmarshaling as XML.\r
-     */\r
-    public java.lang.String getNameSpaceURI(\r
-    ) {\r
-        return _nsURI;\r
+    // -- validation code for: _colourScheme\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { // -- local scope\r
+      org.exolab.castor.xml.validators.StringValidator typeValidator;\r
+      typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+      typeValidator.setWhiteSpace("preserve");\r
     }\r
+    desc.setValidator(fieldValidator);\r
+    // -- _threshold\r
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
+            java.lang.Float.TYPE, "_threshold", "threshold",\r
+            org.exolab.castor.xml.NodeType.Attribute);\r
+    handler = new org.exolab.castor.xml.XMLFieldHandler()\r
+    {\r
+      public java.lang.Object getValue(java.lang.Object object)\r
+              throws IllegalStateException\r
+      {\r
+        AnnotationColours target = (AnnotationColours) object;\r
+        if (!target.hasThreshold())\r
+        {\r
+          return null;\r
+        }\r
+        return new java.lang.Float(target.getThreshold());\r
+      }\r
 \r
-    /**\r
-     * Method getValidator.\r
-     * \r
-     * @return a specific validator for the class described by this\r
-     * ClassDescriptor.\r
-     */\r
-    public org.exolab.castor.xml.TypeValidator getValidator(\r
-    ) {\r
-        return this;\r
-    }\r
+      public void setValue(java.lang.Object object, java.lang.Object value)\r
+              throws IllegalStateException, IllegalArgumentException\r
+      {\r
+        try\r
+        {\r
+          AnnotationColours target = (AnnotationColours) object;\r
+          // if null, use delete method for optional primitives\r
+          if (value == null)\r
+          {\r
+            target.deleteThreshold();\r
+            return;\r
+          }\r
+          target.setThreshold(((java.lang.Float) value).floatValue());\r
+        } catch (java.lang.Exception ex)\r
+        {\r
+          throw new IllegalStateException(ex.toString());\r
+        }\r
+      }\r
 \r
-    /**\r
-     * Method getXMLName.\r
-     * \r
-     * @return the XML Name for the Class being described.\r
-     */\r
-    public java.lang.String getXMLName(\r
-    ) {\r
-        return _xmlName;\r
-    }\r
+      public java.lang.Object newInstance(java.lang.Object parent)\r
+      {\r
+        return null;\r
+      }\r
+    };\r
+    desc.setHandler(handler);\r
+    desc.setMultivalued(false);\r
+    addFieldDescriptor(desc);\r
 \r
-    /**\r
-     * Method isElementDefinition.\r
-     * \r
-     * @return true if XML schema definition of this Class is that\r
-     * of a global\r
-     * element or element with anonymous type definition.\r
-     */\r
-    public boolean isElementDefinition(\r
-    ) {\r
-        return _elementDefinition;\r
+    // -- validation code for: _threshold\r
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+    { // -- local scope\r
+      org.exolab.castor.xml.validators.FloatValidator typeValidator;\r
+      typeValidator = new org.exolab.castor.xml.validators.FloatValidator();\r
+      fieldValidator.setValidator(typeValidator);\r
+      typeValidator.setMinInclusive((float) -3.4028235E38);\r
+      typeValidator.setMaxInclusive((float) 3.4028235E38);\r
     }\r
+    desc.setValidator(fieldValidator);\r
+    // -- initialize element descriptors\r
+\r
+  }\r
+\r
+  // -----------/\r
+  // - Methods -/\r
+  // -----------/\r
+\r
+  /**\r
+   * Method getAccessMode.\r
+   * \r
+   * @return the access mode specified for this class.\r
+   */\r
+  public org.exolab.castor.mapping.AccessMode getAccessMode()\r
+  {\r
+    return null;\r
+  }\r
+\r
+  /**\r
+   * Method getIdentity.\r
+   * \r
+   * @return the identity field, null if this class has no identity.\r
+   */\r
+  public org.exolab.castor.mapping.FieldDescriptor getIdentity()\r
+  {\r
+    return super.getIdentity();\r
+  }\r
+\r
+  /**\r
+   * Method getJavaClass.\r
+   * \r
+   * @return the Java class represented by this descriptor.\r
+   */\r
+  public java.lang.Class getJavaClass()\r
+  {\r
+    return jalview.schemabinding.version2.AnnotationColours.class;\r
+  }\r
+\r
+  /**\r
+   * Method getNameSpacePrefix.\r
+   * \r
+   * @return the namespace prefix to use when marshaling as XML.\r
+   */\r
+  public java.lang.String getNameSpacePrefix()\r
+  {\r
+    return _nsPrefix;\r
+  }\r
+\r
+  /**\r
+   * Method getNameSpaceURI.\r
+   * \r
+   * @return the namespace URI used when marshaling and unmarshaling as XML.\r
+   */\r
+  public java.lang.String getNameSpaceURI()\r
+  {\r
+    return _nsURI;\r
+  }\r
+\r
+  /**\r
+   * Method getValidator.\r
+   * \r
+   * @return a specific validator for the class described by this\r
+   *         ClassDescriptor.\r
+   */\r
+  public org.exolab.castor.xml.TypeValidator getValidator()\r
+  {\r
+    return this;\r
+  }\r
+\r
+  /**\r
+   * Method getXMLName.\r
+   * \r
+   * @return the XML Name for the Class being described.\r
+   */\r
+  public java.lang.String getXMLName()\r
+  {\r
+    return _xmlName;\r
+  }\r
+\r
+  /**\r
+   * Method isElementDefinition.\r
+   * \r
+   * @return true if XML schema definition of this Class is that of a global\r
+   *         element or element with anonymous type definition.\r
+   */\r
+  public boolean isElementDefinition()\r
+  {\r
+    return _elementDefinition;\r
+  }\r
 \r
 }\r