/*\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)\r
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
- * \r
- * This program is free software; you can redistribute it and/or\r
- * modify it under the terms of the GNU General Public License\r
- * as published by the Free Software Foundation; either version 2\r
- * of the License, or (at your option) any later version.\r
- * \r
- * This program is distributed in the hope that it will be useful,\r
- * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
- * GNU General Public License for more details.\r
- * \r
- * You should have received a copy of the GNU General Public License\r
- * along with this program; if not, write to the Free Software\r
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
+ * This class was automatically generated with \r
+ * <a href="http://www.castor.org">Castor 1.1</a>, using an XML\r
+ * Schema.\r
+ * $Id$\r
*/\r
+\r
package jalview.schemabinding.version2.descriptors;\r
\r
-// ---------------------------------/\r
-// - Imported classes and packages -/\r
-// ---------------------------------/\r
+ //---------------------------------/\r
+ //- Imported classes and packages -/\r
+//---------------------------------/\r
\r
import jalview.schemabinding.version2.Tree;\r
\r
* \r
* @version $Revision$ $Date$\r
*/\r
-public class TreeDescriptor extends\r
- org.exolab.castor.xml.util.XMLClassDescriptorImpl\r
-{\r
-\r
- // --------------------------/\r
- // - Class/Member Variables -/\r
- // --------------------------/\r
-\r
- /**\r
- * Field _elementDefinition.\r
- */\r
- private boolean _elementDefinition;\r
-\r
- /**\r
- * Field _nsPrefix.\r
- */\r
- private java.lang.String _nsPrefix;\r
-\r
- /**\r
- * Field _nsURI.\r
- */\r
- private java.lang.String _nsURI;\r
-\r
- /**\r
- * Field _xmlName.\r
- */\r
- private java.lang.String _xmlName;\r
-\r
- // ----------------/\r
- // - Constructors -/\r
- // ----------------/\r
-\r
- public TreeDescriptor()\r
- {\r
- super();\r
- _nsURI = "www.jalview.org";\r
- _xmlName = "tree";\r
- _elementDefinition = true;\r
-\r
- // -- set grouping compositor\r
- setCompositorAsSequence();\r
- org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;\r
- org.exolab.castor.mapping.FieldHandler handler = null;\r
- org.exolab.castor.xml.FieldValidator fieldValidator = null;\r
- // -- initialize attribute descriptors\r
-\r
- // -- _width\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Integer.TYPE, "_width", "width",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasWidth())\r
- {\r
- return null;\r
+public class TreeDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {\r
+\r
+\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _elementDefinition.\r
+ */\r
+ private boolean _elementDefinition;\r
+\r
+ /**\r
+ * Field _nsPrefix.\r
+ */\r
+ private java.lang.String _nsPrefix;\r
+\r
+ /**\r
+ * Field _nsURI.\r
+ */\r
+ private java.lang.String _nsURI;\r
+\r
+ /**\r
+ * Field _xmlName.\r
+ */\r
+ private java.lang.String _xmlName;\r
+\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public TreeDescriptor() {\r
+ super();\r
+ _nsURI = "www.jalview.org";\r
+ _xmlName = "tree";\r
+ _elementDefinition = true;\r
+ \r
+ //-- set grouping compositor\r
+ setCompositorAsSequence();\r
+ org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;\r
+ org.exolab.castor.mapping.FieldHandler handler = null;\r
+ org.exolab.castor.xml.FieldValidator fieldValidator = null;\r
+ //-- initialize attribute descriptors\r
+ \r
+ //-- _width\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_width", "width", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasWidth()) { return null; }\r
+ return new java.lang.Integer(target.getWidth());\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteWidth();\r
+ return;\r
+ }\r
+ target.setWidth( ((java.lang.Integer) value).intValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _width\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setMinInclusive(-2147483648);\r
+ typeValidator.setMaxInclusive(2147483647);\r
}\r
- return new java.lang.Integer(target.getWidth());\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteWidth();\r
- return;\r
- }\r
- target.setWidth(((java.lang.Integer) value).intValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _height\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_height", "height", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasHeight()) { return null; }\r
+ return new java.lang.Integer(target.getHeight());\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteHeight();\r
+ return;\r
+ }\r
+ target.setHeight( ((java.lang.Integer) value).intValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _height\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setMinInclusive(-2147483648);\r
+ typeValidator.setMaxInclusive(2147483647);\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _width\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.IntValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setMinInclusive(-2147483648);\r
- typeValidator.setMaxInclusive(2147483647);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _height\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Integer.TYPE, "_height", "height",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasHeight())\r
- {\r
- return null;\r
+ desc.setValidator(fieldValidator);\r
+ //-- _xpos\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_xpos", "xpos", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasXpos()) { return null; }\r
+ return new java.lang.Integer(target.getXpos());\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteXpos();\r
+ return;\r
+ }\r
+ target.setXpos( ((java.lang.Integer) value).intValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _xpos\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setMinInclusive(-2147483648);\r
+ typeValidator.setMaxInclusive(2147483647);\r
}\r
- return new java.lang.Integer(target.getHeight());\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteHeight();\r
- return;\r
- }\r
- target.setHeight(((java.lang.Integer) value).intValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _ypos\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_ypos", "ypos", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasYpos()) { return null; }\r
+ return new java.lang.Integer(target.getYpos());\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteYpos();\r
+ return;\r
+ }\r
+ target.setYpos( ((java.lang.Integer) value).intValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _ypos\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setMinInclusive(-2147483648);\r
+ typeValidator.setMaxInclusive(2147483647);\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _height\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.IntValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setMinInclusive(-2147483648);\r
- typeValidator.setMaxInclusive(2147483647);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _xpos\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Integer.TYPE, "_xpos", "xpos",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasXpos())\r
- {\r
- return null;\r
+ desc.setValidator(fieldValidator);\r
+ //-- _fontName\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_fontName", "fontName", org.exolab.castor.xml.NodeType.Attribute);\r
+ desc.setImmutable(true);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ return target.getFontName();\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ target.setFontName( (java.lang.String) value);\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _fontName\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.StringValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setWhiteSpace("preserve");\r
}\r
- return new java.lang.Integer(target.getXpos());\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteXpos();\r
- return;\r
- }\r
- target.setXpos(((java.lang.Integer) value).intValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _fontSize\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_fontSize", "fontSize", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasFontSize()) { return null; }\r
+ return new java.lang.Integer(target.getFontSize());\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteFontSize();\r
+ return;\r
+ }\r
+ target.setFontSize( ((java.lang.Integer) value).intValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _fontSize\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setMinInclusive(-2147483648);\r
+ typeValidator.setMaxInclusive(2147483647);\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _xpos\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.IntValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setMinInclusive(-2147483648);\r
- typeValidator.setMaxInclusive(2147483647);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _ypos\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Integer.TYPE, "_ypos", "ypos",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasYpos())\r
- {\r
- return null;\r
+ desc.setValidator(fieldValidator);\r
+ //-- _fontStyle\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_fontStyle", "fontStyle", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasFontStyle()) { return null; }\r
+ return new java.lang.Integer(target.getFontStyle());\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteFontStyle();\r
+ return;\r
+ }\r
+ target.setFontStyle( ((java.lang.Integer) value).intValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _fontStyle\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.IntValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setMinInclusive(-2147483648);\r
+ typeValidator.setMaxInclusive(2147483647);\r
}\r
- return new java.lang.Integer(target.getYpos());\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteYpos();\r
- return;\r
- }\r
- target.setYpos(((java.lang.Integer) value).intValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _threshold\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Float.TYPE, "_threshold", "threshold", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasThreshold()) { return null; }\r
+ return new java.lang.Float(target.getThreshold());\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteThreshold();\r
+ return;\r
+ }\r
+ target.setThreshold( ((java.lang.Float) value).floatValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _threshold\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.FloatValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.FloatValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setMinInclusive((float) -3.4028235E38);\r
+ typeValidator.setMaxInclusive((float) 3.4028235E38);\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _ypos\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.IntValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setMinInclusive(-2147483648);\r
- typeValidator.setMaxInclusive(2147483647);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _fontName\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.String.class, "_fontName", "fontName",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- desc.setImmutable(true);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- return target.getFontName();\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- target.setFontName((java.lang.String) value);\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _showBootstrap\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_showBootstrap", "showBootstrap", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasShowBootstrap()) { return null; }\r
+ return (target.getShowBootstrap() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteShowBootstrap();\r
+ return;\r
+ }\r
+ target.setShowBootstrap( ((java.lang.Boolean) value).booleanValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _showBootstrap\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _fontName\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.StringValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setWhiteSpace("preserve");\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _fontSize\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Integer.TYPE, "_fontSize", "fontSize",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasFontSize())\r
- {\r
- return null;\r
+ desc.setValidator(fieldValidator);\r
+ //-- _showDistances\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_showDistances", "showDistances", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasShowDistances()) { return null; }\r
+ return (target.getShowDistances() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteShowDistances();\r
+ return;\r
+ }\r
+ target.setShowDistances( ((java.lang.Boolean) value).booleanValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _showDistances\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
}\r
- return new java.lang.Integer(target.getFontSize());\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteFontSize();\r
- return;\r
- }\r
- target.setFontSize(((java.lang.Integer) value).intValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _markUnlinked\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_markUnlinked", "markUnlinked", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasMarkUnlinked()) { return null; }\r
+ return (target.getMarkUnlinked() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteMarkUnlinked();\r
+ return;\r
+ }\r
+ target.setMarkUnlinked( ((java.lang.Boolean) value).booleanValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _markUnlinked\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _fontSize\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.IntValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setMinInclusive(-2147483648);\r
- typeValidator.setMaxInclusive(2147483647);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _fontStyle\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Integer.TYPE, "_fontStyle", "fontStyle",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasFontStyle())\r
- {\r
- return null;\r
+ desc.setValidator(fieldValidator);\r
+ //-- _fitToWindow\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_fitToWindow", "fitToWindow", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasFitToWindow()) { return null; }\r
+ return (target.getFitToWindow() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteFitToWindow();\r
+ return;\r
+ }\r
+ target.setFitToWindow( ((java.lang.Boolean) value).booleanValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _fitToWindow\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
}\r
- return new java.lang.Integer(target.getFontStyle());\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteFontStyle();\r
- return;\r
- }\r
- target.setFontStyle(((java.lang.Integer) value).intValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _currentTree\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_currentTree", "currentTree", org.exolab.castor.xml.NodeType.Attribute);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ if (!target.hasCurrentTree()) { return null; }\r
+ return (target.getCurrentTree() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ // if null, use delete method for optional primitives \r
+ if (value == null) {\r
+ target.deleteCurrentTree();\r
+ return;\r
+ }\r
+ target.setCurrentTree( ((java.lang.Boolean) value).booleanValue());\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _currentTree\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _fontStyle\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.IntValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.IntValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setMinInclusive(-2147483648);\r
- typeValidator.setMaxInclusive(2147483647);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _threshold\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Float.TYPE, "_threshold", "threshold",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasThreshold())\r
- {\r
- return null;\r
+ desc.setValidator(fieldValidator);\r
+ //-- _id\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);\r
+ super.setIdentity(desc);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ return target.getId();\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ target.setId( (java.lang.String) value);\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return new java.lang.String();\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _id\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.IdValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.IdValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
}\r
- return new java.lang.Float(target.getThreshold());\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteThreshold();\r
- return;\r
- }\r
- target.setThreshold(((java.lang.Float) value).floatValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
- }\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _threshold\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.FloatValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.FloatValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setMinInclusive((float) -3.4028235E38);\r
- typeValidator.setMaxInclusive((float) 3.4028235E38);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _showBootstrap\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Boolean.TYPE, "_showBootstrap", "showBootstrap",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasShowBootstrap())\r
- {\r
- return null;\r
+ desc.setValidator(fieldValidator);\r
+ //-- initialize element descriptors\r
+ \r
+ //-- _title\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_title", "title", org.exolab.castor.xml.NodeType.Element);\r
+ desc.setImmutable(true);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ return target.getTitle();\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ target.setTitle( (java.lang.String) value);\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setNameSpaceURI("www.jalview.org");\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _title\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.StringValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setWhiteSpace("preserve");\r
}\r
- return (target.getShowBootstrap() ? java.lang.Boolean.TRUE\r
- : java.lang.Boolean.FALSE);\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteShowBootstrap();\r
- return;\r
- }\r
- target.setShowBootstrap(((java.lang.Boolean) value)\r
- .booleanValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
+ desc.setValidator(fieldValidator);\r
+ //-- _newick\r
+ desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_newick", "newick", org.exolab.castor.xml.NodeType.Element);\r
+ desc.setImmutable(true);\r
+ handler = new org.exolab.castor.xml.XMLFieldHandler() {\r
+ public java.lang.Object getValue( java.lang.Object object ) \r
+ throws IllegalStateException\r
+ {\r
+ Tree target = (Tree) object;\r
+ return target.getNewick();\r
+ }\r
+ public void setValue( java.lang.Object object, java.lang.Object value) \r
+ throws IllegalStateException, IllegalArgumentException\r
+ {\r
+ try {\r
+ Tree target = (Tree) object;\r
+ target.setNewick( (java.lang.String) value);\r
+ } catch (java.lang.Exception ex) {\r
+ throw new IllegalStateException(ex.toString());\r
+ }\r
+ }\r
+ public java.lang.Object newInstance(java.lang.Object parent) {\r
+ return null;\r
+ }\r
+ };\r
+ desc.setHandler(handler);\r
+ desc.setNameSpaceURI("www.jalview.org");\r
+ desc.setMultivalued(false);\r
+ addFieldDescriptor(desc);\r
+ \r
+ //-- validation code for: _newick\r
+ fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+ { //-- local scope\r
+ org.exolab.castor.xml.validators.StringValidator typeValidator;\r
+ typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
+ fieldValidator.setValidator(typeValidator);\r
+ typeValidator.setWhiteSpace("preserve");\r
}\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _showBootstrap\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
- fieldValidator.setValidator(typeValidator);\r
+ desc.setValidator(fieldValidator);\r
}\r
- desc.setValidator(fieldValidator);\r
- // -- _showDistances\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Boolean.TYPE, "_showDistances", "showDistances",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasShowDistances())\r
- {\r
- return null;\r
- }\r
- return (target.getShowDistances() ? java.lang.Boolean.TRUE\r
- : java.lang.Boolean.FALSE);\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteShowDistances();\r
- return;\r
- }\r
- target.setShowDistances(((java.lang.Boolean) value)\r
- .booleanValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
- }\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
\r
- // -- validation code for: _showDistances\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- }\r
- desc.setValidator(fieldValidator);\r
- // -- _markUnlinked\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Boolean.TYPE, "_markUnlinked", "markUnlinked",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasMarkUnlinked())\r
- {\r
- return null;\r
- }\r
- return (target.getMarkUnlinked() ? java.lang.Boolean.TRUE\r
- : java.lang.Boolean.FALSE);\r
- }\r
\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteMarkUnlinked();\r
- return;\r
- }\r
- target\r
- .setMarkUnlinked(((java.lang.Boolean) value)\r
- .booleanValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
- }\r
- }\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
+ /**\r
+ * Method getAccessMode.\r
+ * \r
+ * @return the access mode specified for this class.\r
+ */\r
+ public org.exolab.castor.mapping.AccessMode getAccessMode(\r
+ ) {\r
return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _markUnlinked\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
- fieldValidator.setValidator(typeValidator);\r
}\r
- desc.setValidator(fieldValidator);\r
- // -- _fitToWindow\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Boolean.TYPE, "_fitToWindow", "fitToWindow",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasFitToWindow())\r
- {\r
- return null;\r
- }\r
- return (target.getFitToWindow() ? java.lang.Boolean.TRUE\r
- : java.lang.Boolean.FALSE);\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteFitToWindow();\r
- return;\r
- }\r
- target.setFitToWindow(((java.lang.Boolean) value).booleanValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
- }\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
\r
- // -- validation code for: _fitToWindow\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
- fieldValidator.setValidator(typeValidator);\r
+ /**\r
+ * Method getIdentity.\r
+ * \r
+ * @return the identity field, null if this class has no\r
+ * identity.\r
+ */\r
+ public org.exolab.castor.mapping.FieldDescriptor getIdentity(\r
+ ) {\r
+ return super.getIdentity();\r
}\r
- desc.setValidator(fieldValidator);\r
- // -- _currentTree\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.Boolean.TYPE, "_currentTree", "currentTree",\r
- org.exolab.castor.xml.NodeType.Attribute);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- if (!target.hasCurrentTree())\r
- {\r
- return null;\r
- }\r
- return (target.getCurrentTree() ? java.lang.Boolean.TRUE\r
- : java.lang.Boolean.FALSE);\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- // if null, use delete method for optional primitives\r
- if (value == null)\r
- {\r
- target.deleteCurrentTree();\r
- return;\r
- }\r
- target.setCurrentTree(((java.lang.Boolean) value).booleanValue());\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
- }\r
- }\r
\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _currentTree\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.BooleanValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();\r
- fieldValidator.setValidator(typeValidator);\r
+ /**\r
+ * Method getJavaClass.\r
+ * \r
+ * @return the Java class represented by this descriptor.\r
+ */\r
+ public java.lang.Class getJavaClass(\r
+ ) {\r
+ return jalview.schemabinding.version2.Tree.class;\r
}\r
- desc.setValidator(fieldValidator);\r
- // -- initialize element descriptors\r
-\r
- // -- _title\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.String.class, "_title", "title",\r
- org.exolab.castor.xml.NodeType.Element);\r
- desc.setImmutable(true);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- return target.getTitle();\r
- }\r
\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- target.setTitle((java.lang.String) value);\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
- }\r
- }\r
-\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setNameSpaceURI("www.jalview.org");\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _title\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.StringValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setWhiteSpace("preserve");\r
+ /**\r
+ * Method getNameSpacePrefix.\r
+ * \r
+ * @return the namespace prefix to use when marshaling as XML.\r
+ */\r
+ public java.lang.String getNameSpacePrefix(\r
+ ) {\r
+ return _nsPrefix;\r
}\r
- desc.setValidator(fieldValidator);\r
- // -- _newick\r
- desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(\r
- java.lang.String.class, "_newick", "newick",\r
- org.exolab.castor.xml.NodeType.Element);\r
- desc.setImmutable(true);\r
- handler = new org.exolab.castor.xml.XMLFieldHandler()\r
- {\r
- public java.lang.Object getValue(java.lang.Object object)\r
- throws IllegalStateException\r
- {\r
- Tree target = (Tree) object;\r
- return target.getNewick();\r
- }\r
-\r
- public void setValue(java.lang.Object object, java.lang.Object value)\r
- throws IllegalStateException, IllegalArgumentException\r
- {\r
- try\r
- {\r
- Tree target = (Tree) object;\r
- target.setNewick((java.lang.String) value);\r
- } catch (java.lang.Exception ex)\r
- {\r
- throw new IllegalStateException(ex.toString());\r
- }\r
- }\r
\r
- public java.lang.Object newInstance(java.lang.Object parent)\r
- {\r
- return null;\r
- }\r
- };\r
- desc.setHandler(handler);\r
- desc.setNameSpaceURI("www.jalview.org");\r
- desc.setMultivalued(false);\r
- addFieldDescriptor(desc);\r
-\r
- // -- validation code for: _newick\r
- fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
- { // -- local scope\r
- org.exolab.castor.xml.validators.StringValidator typeValidator;\r
- typeValidator = new org.exolab.castor.xml.validators.StringValidator();\r
- fieldValidator.setValidator(typeValidator);\r
- typeValidator.setWhiteSpace("preserve");\r
+ /**\r
+ * Method getNameSpaceURI.\r
+ * \r
+ * @return the namespace URI used when marshaling and\r
+ * unmarshaling as XML.\r
+ */\r
+ public java.lang.String getNameSpaceURI(\r
+ ) {\r
+ return _nsURI;\r
}\r
- desc.setValidator(fieldValidator);\r
- }\r
-\r
- // -----------/\r
- // - Methods -/\r
- // -----------/\r
-\r
- /**\r
- * Method getAccessMode.\r
- * \r
- * @return the access mode specified for this class.\r
- */\r
- public org.exolab.castor.mapping.AccessMode getAccessMode()\r
- {\r
- return null;\r
- }\r
-\r
- /**\r
- * Method getIdentity.\r
- * \r
- * @return the identity field, null if this class has no identity.\r
- */\r
- public org.exolab.castor.mapping.FieldDescriptor getIdentity()\r
- {\r
- return super.getIdentity();\r
- }\r
-\r
- /**\r
- * Method getJavaClass.\r
- * \r
- * @return the Java class represented by this descriptor.\r
- */\r
- public java.lang.Class getJavaClass()\r
- {\r
- return jalview.schemabinding.version2.Tree.class;\r
- }\r
\r
- /**\r
- * Method getNameSpacePrefix.\r
- * \r
- * @return the namespace prefix to use when marshaling as XML.\r
- */\r
- public java.lang.String getNameSpacePrefix()\r
- {\r
- return _nsPrefix;\r
- }\r
-\r
- /**\r
- * Method getNameSpaceURI.\r
- * \r
- * @return the namespace URI used when marshaling and unmarshaling as XML.\r
- */\r
- public java.lang.String getNameSpaceURI()\r
- {\r
- return _nsURI;\r
- }\r
-\r
- /**\r
- * Method getValidator.\r
- * \r
- * @return a specific validator for the class described by this\r
- * ClassDescriptor.\r
- */\r
- public org.exolab.castor.xml.TypeValidator getValidator()\r
- {\r
- return this;\r
- }\r
+ /**\r
+ * Method getValidator.\r
+ * \r
+ * @return a specific validator for the class described by this\r
+ * ClassDescriptor.\r
+ */\r
+ public org.exolab.castor.xml.TypeValidator getValidator(\r
+ ) {\r
+ return this;\r
+ }\r
\r
- /**\r
- * Method getXMLName.\r
- * \r
- * @return the XML Name for the Class being described.\r
- */\r
- public java.lang.String getXMLName()\r
- {\r
- return _xmlName;\r
- }\r
+ /**\r
+ * Method getXMLName.\r
+ * \r
+ * @return the XML Name for the Class being described.\r
+ */\r
+ public java.lang.String getXMLName(\r
+ ) {\r
+ return _xmlName;\r
+ }\r
\r
- /**\r
- * Method isElementDefinition.\r
- * \r
- * @return true if XML schema definition of this Class is that of a global\r
- * element or element with anonymous type definition.\r
- */\r
- public boolean isElementDefinition()\r
- {\r
- return _elementDefinition;\r
- }\r
+ /**\r
+ * Method isElementDefinition.\r
+ * \r
+ * @return true if XML schema definition of this Class is that\r
+ * of a global\r
+ * element or element with anonymous type definition.\r
+ */\r
+ public boolean isElementDefinition(\r
+ ) {\r
+ return _elementDefinition;\r
+ }\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff