JAL-98 ProfileI interface for Profile

[jalview.git] / src / jalview / schemes / ResidueColourScheme.java

diff --git a/src/jalview/schemes/ResidueColourScheme.java b/src/jalview/schemes/ResidueColourScheme.java
index c9abb0e..31b8320 100755 (executable)
--- a/src/jalview/schemes/ResidueColourScheme.java
+++ b/src/jalview/schemes/ResidueColourScheme.java
@@ -22,7 +22,7 @@ package jalview.schemes;
 
 import jalview.analysis.Conservation;
 import jalview.datamodel.AnnotatedCollectionI;
-import jalview.datamodel.Profile;
+import jalview.datamodel.ProfileI;
 import jalview.datamodel.SequenceCollectionI;
 import jalview.datamodel.SequenceI;
 import jalview.util.ColorUtils;
@@ -54,7 +54,7 @@ public class ResidueColourScheme implements ColourSchemeI
   /*
    * Consensus data indexed by column
    */
-  Profile[] consensus;
+  ProfileI[] consensus;
 
   /*
    * Conservation string as a char array 
@@ -234,7 +234,7 @@ public class ResidueColourScheme implements ColourSchemeI
    *          DOCUMENT ME!
    */
   @Override
-  public void setConsensus(Profile[] consensus)
+  public void setConsensus(ProfileI[] consensus)
   {
     if (consensus == null)
     {