JAL-1691 applet SplitFrame scrolling; pull up of 5 fields to

[jalview.git] / src / jalview / util / MappingUtils.java

diff --git a/src/jalview/util/MappingUtils.java b/src/jalview/util/MappingUtils.java
index c6cbdc5..4aed258 100644 (file)
--- a/src/jalview/util/MappingUtils.java
+++ b/src/jalview/util/MappingUtils.java
@@ -250,8 +250,23 @@ public final class MappingUtils
   public static SearchResults buildSearchResults(SequenceI seq, int index,
           Set<AlignedCodonFrame> seqmappings)
   {
-    SearchResults results;
-    results = new SearchResults();
+    SearchResults results = new SearchResults();
+    addSearchResults(results, seq, index, seqmappings);
+    return results;
+  }
+
+  /**
+   * Adds entries to a SearchResults object describing the mapped region
+   * corresponding to the specified sequence position.
+   * 
+   * @param results
+   * @param seq
+   * @param index
+   * @param seqmappings
+   */
+  public static void addSearchResults(SearchResults results, SequenceI seq,
+          int index, Set<AlignedCodonFrame> seqmappings)
+  {
     if (index >= seq.getStart() && index <= seq.getEnd())
     {
       for (AlignedCodonFrame acf : seqmappings)
@@ -259,7 +274,6 @@ public final class MappingUtils
         acf.markMappedRegion(seq, index, results);
       }
     }
-    return results;
   }
 
   /**