{
PDB_ID("PDB Id", "pdb_id", Group.CROSS_REFS), TITLE(
"Title",
- "title", Group.MISCELLANEOUS), MOLECULE_NAME("Molecule",
+ "title", Group.MISCELLENOUS),
+ MOLECULE_NAME("Molecule",
"molecule_name",
Group.NAMES_AND_TAXONOMY), MOLECULE_TYPE(
"Molecule Type", "molecule_type", Group.NAMES_AND_TAXONOMY), MOLECULE_SEQUENCE(
- "Sequence", "molecule_sequence", Group.MISCELLANEOUS), PFAM_ACCESSION(
+ "Sequence", "molecule_sequence", Group.MISCELLENOUS), PFAM_ACCESSION(
"PFAM Accession", "pfam_accession",
Group.CROSS_REFS), PFAM_NAME(
"PFAM Name", "pfam_name", Group.NAMES_AND_TAXONOMY), INTERPRO_NAME(
Group.CROSS_REFS),
UNIPROT_COVERAGE(
- "UniProt Coverage", "uniprot_coverage", Group.MISCELLANEOUS), UNIPROT_FEATURES(
- "Uniprot Features", "uniprot_features", Group.MISCELLANEOUS), R_FACTOR(
+ "UniProt Coverage", "uniprot_coverage", Group.MISCELLENOUS), UNIPROT_FEATURES(
+ "Uniprot Features", "uniprot_features", Group.MISCELLENOUS), R_FACTOR(
"R Factor",
"r_factor", Group.QUALITY_MEASURES), RESOLUTION("Resolution",
"resolution", Group.QUALITY_MEASURES), DATA_QUALITY(
"Data Quality", "data_quality", Group.QUALITY_MEASURES), OVERALL_QUALITY(
"Overall Quality", "overall_quality", Group.QUALITY_MEASURES), POLYMER_COUNT(
- "Number of Polymers", "number_of_polymers", Group.MISCELLANEOUS), PROTEIN_CHAIN_COUNT(
+ "Number of Polymers", "number_of_polymers", Group.MISCELLENOUS), PROTEIN_CHAIN_COUNT(
"Number of Protein Chains", "number_of_protein_chains",
- Group.MISCELLANEOUS), BOUND_MOLECULE_COUNT(
+ Group.MISCELLENOUS), BOUND_MOLECULE_COUNT(
"Number of Bound Molecule", "number_of_bound_molecules",
- Group.MISCELLANEOUS), POLYMER_RESIDUE_COUNT(
+ Group.MISCELLENOUS), POLYMER_RESIDUE_COUNT(
"Number of Polymer Residue", "number_of_polymer_residues",
- Group.MISCELLANEOUS), GENUS("GENUS", "genus",
+ Group.MISCELLENOUS), GENUS("GENUS", "genus",
Group.NAMES_AND_TAXONOMY), GENE_NAME("Gene Name", "gene_name",
Group.NAMES_AND_TAXONOMY), EXPERIMENTAL_METHOD(
"Experimental Method", "experimental_method",
Group.PROCEDURE_AND_SOFTWARE), GO_ID("GO Id", "go_id",
Group.CROSS_REFS), ASSEMBLY_ID("Assembly Id",
"assembly_id", Group.CROSS_REFS), ASSEMBLY_FORM(
- "Assembly Form", "assembly_form", Group.MISCELLANEOUS), ASSEMBLY_TYPE(
- "Assembly Type", "assembly_type", Group.MISCELLANEOUS), SPACE_GROUP(
- "Space Group", "spacegroup", Group.MISCELLANEOUS), CATH_CODE(
+ "Assembly Form", "assembly_form", Group.MISCELLENOUS), ASSEMBLY_TYPE(
+ "Assembly Type", "assembly_type", Group.MISCELLENOUS), SPACE_GROUP(
+ "Space Group", "spacegroup", Group.MISCELLENOUS), CATH_CODE(
"Cath Code", "cath_code", Group.CROSS_REFS), TAX_ID(
"Tax Id", "tax_id", Group.CROSS_REFS), TAX_QUERY(
"Tax Query", "tax_query", Group.CROSS_REFS), INTERACTING_ENTITY_ID(
"Interacting Entity Id", "interacting_entity_id",
Group.CROSS_REFS), INTERACTING_MOLECULES(
"Interacting Molecules", "interacting_molecules",
- Group.MISCELLANEOUS), PUBMED_ID("Pubmed Id", "pubmed_id",
+ Group.MISCELLENOUS), PUBMED_ID("Pubmed Id", "pubmed_id",
Group.CROSS_REFS), STATUS("Status", "status",
- Group.MISCELLANEOUS), MODEL_QUALITY("Model Quality",
+ Group.MISCELLENOUS), MODEL_QUALITY("Model Quality",
"model_quality", Group.QUALITY_MEASURES), PIVOT_RESOLUTION(
"Pivot Resolution", "pivot_resolution", Group.QUALITY_MEASURES), DATA_REDUCTION_SOFTWARE(
"Data reduction software", "data_reduction_software",
Group.PROCEDURE_AND_SOFTWARE), MAX_OBSERVED_RES(
"Max observed residues",
- "max_observed_residues", Group.MISCELLANEOUS), ORG_SCI_NAME(
+ "max_observed_residues", Group.MISCELLENOUS), ORG_SCI_NAME(
"Organism scientific name", "organism_scientific_name",
Group.NAMES_AND_TAXONOMY), SUPER_KINGDOM("Super kingdom",
"superkingdom", Group.NAMES_AND_TAXONOMY), RANK("Rank", "rank",
Group.NAMES_AND_TAXONOMY), CRYSTALLISATION_PH(
"Crystallisation Ph",
- "crystallisation_ph", Group.MISCELLANEOUS), BIOLOGICAL_FUNCTION(
+ "crystallisation_ph", Group.MISCELLENOUS), BIOLOGICAL_FUNCTION(
"Biological Function", "biological_function",
- Group.MISCELLANEOUS), BIOLOGICAL_PROCESS("Biological Process",
- "biological_process", Group.MISCELLANEOUS), BIOLOGICAL_CELL_COMPONENT(
+ Group.MISCELLENOUS), BIOLOGICAL_PROCESS("Biological Process",
+ "biological_process", Group.MISCELLENOUS), BIOLOGICAL_CELL_COMPONENT(
"Biological Cell Component", "biological_cell_component",
- Group.MISCELLANEOUS), COMPOUND_NAME("Compound Name",
+ Group.MISCELLENOUS), COMPOUND_NAME("Compound Name",
"compound_name", Group.NAMES_AND_TAXONOMY), COMPOUND_ID(
"Compound Id", "compound_id", Group.CROSS_REFS), COMPOUND_WEIGHT(
- "Compound Weight", "compound_weight", Group.MISCELLANEOUS), COMPOUND_SYSTEMATIC_NAME(
+ "Compound Weight", "compound_weight", Group.MISCELLENOUS), COMPOUND_SYSTEMATIC_NAME(
"Compound Systematic Name", "compound_systematic_name",
Group.NAMES_AND_TAXONOMY), INTERACTING_LIG(
"Interacting Ligands",
- "interacting_ligands", Group.MISCELLANEOUS), JOURNAL("Journal",
- "journal", Group.MISCELLANEOUS), ALL_AUTHORS("All Authors",
- "all_authors", Group.MISCELLANEOUS), EXPERIMENTAL_DATA_AVAILABLE(
+ "interacting_ligands", Group.MISCELLENOUS), JOURNAL("Journal",
+ "journal", Group.MISCELLENOUS), ALL_AUTHORS("All Authors",
+ "all_authors", Group.MISCELLENOUS), EXPERIMENTAL_DATA_AVAILABLE(
"Experiment Data Available", "experiment_data_available",
- Group.MISCELLANEOUS), DIFFRACTION_PROTOCOL(
+ Group.MISCELLENOUS), DIFFRACTION_PROTOCOL(
"Diffraction Protocol", "diffraction_protocol",
Group.PROCEDURE_AND_SOFTWARE), REFINEMENT_SOFTWARE(
"Refinement Software", "refinement_software",
Group.PROCEDURE_AND_SOFTWARE), STRUCTURE_DETERMINATION_METHOD(
"Structure Determination Method",
"structure_determination_method", Group.PROCEDURE_AND_SOFTWARE), SYNCHROTON_SITE(
- "Synchrotron Site", "synchrotron_site", Group.MISCELLANEOUS), SAMPLE_PREP_METHOD(
+ "Synchrotron Site", "synchrotron_site", Group.MISCELLENOUS), SAMPLE_PREP_METHOD(
"Sample Preparation Method", "sample_preparation_method",
Group.PROCEDURE_AND_SOFTWARE), ENTRY_AUTHORS("Entry Authors",
- "entry_authors", Group.MISCELLANEOUS), CITATION_TITLE(
- "Citation Title", "citation_title", Group.MISCELLANEOUS), STRUCTURE_SOLUTION_SOFTWARE(
+ "entry_authors", Group.MISCELLENOUS), CITATION_TITLE(
+ "Citation Title", "citation_title", Group.MISCELLENOUS), STRUCTURE_SOLUTION_SOFTWARE(
"Structure Solution Software", "structure_solution_software",
Group.PROCEDURE_AND_SOFTWARE), ENTRY_ENTITY("Entry Entity",
- "entry_entity", Group.MISCELLANEOUS), R_FREE("R Free", "r_free",
+ "entry_entity", Group.MISCELLENOUS), R_FREE("R Free", "r_free",
Group.QUALITY_MEASURES), NO_OF_POLYMER_ENTITIES(
"Number of Polymer Entities", "number_of_polymer_entities",
- Group.MISCELLANEOUS), NO_OF_BOUND_ENTITIES(
+ Group.MISCELLENOUS), NO_OF_BOUND_ENTITIES(
"Number of Bound Entities", "number_of_bound_entities",
- Group.MISCELLANEOUS), CRYSTALLISATION_RESERVOIR(
+ Group.MISCELLENOUS), CRYSTALLISATION_RESERVOIR(
"Crystallisation Reservoir", "crystallisation_reservoir",
- Group.MISCELLANEOUS), DATA_SCALING_SW("Data Scalling Software",
- "data_scaling_software", Group.PROCEDURE_AND_SOFTWARE), DETECTOR(
- "Detector", "detector", Group.MISCELLANEOUS), DETECTOR_TYPE(
- "Detector Type", "detector_type", Group.MISCELLANEOUS), MODIFIED_RESIDUE_FLAG(
+ Group.MISCELLENOUS), DATA_SCALING_SW("Data Scalling Software",
+ "data_scaling_software", Group.PROCEDURE_AND_SOFTWARE), DETECTOR(
+ "Detector", "detector", Group.MISCELLENOUS), DETECTOR_TYPE(
+ "Detector Type", "detector_type", Group.MISCELLENOUS), MODIFIED_RESIDUE_FLAG(
"Modified Residue Flag", "modified_residue_flag",
- Group.MISCELLANEOUS), NUMBER_OF_COPIES("Number of Copies",
- "number_of_copies", Group.MISCELLANEOUS), STRUCT_ASYM_ID(
+ Group.MISCELLENOUS), NUMBER_OF_COPIES("Number of Copies",
+ "number_of_copies", Group.MISCELLENOUS), STRUCT_ASYM_ID(
"Struc Asym Id", "struct_asym_id",
Group.CROSS_REFS), HOMOLOGUS_PDB_ENTITY_ID(
"Homologus PDB Entity Id", "homologus_pdb_entity_id",
Group.CROSS_REFS), MOLECULE_SYNONYM(
"Molecule Synonym",
- "molecule_synonym", Group.MISCELLANEOUS), DEPOSITION_SITE(
- "Deposition Site", "deposition_site", Group.MISCELLANEOUS), SYNCHROTRON_BEAMLINE(
+ "molecule_synonym", Group.MISCELLENOUS), DEPOSITION_SITE(
+ "Deposition Site", "deposition_site", Group.MISCELLENOUS), SYNCHROTRON_BEAMLINE(
"Synchrotron Beamline", "synchrotron_beamline",
- Group.MISCELLANEOUS), ENTITY_ID("Entity Id", "entity_id",
+ Group.MISCELLENOUS), ENTITY_ID("Entity Id", "entity_id",
Group.CROSS_REFS), BEAM_SOURCE_NAME(
"Beam Source Name",
"beam_source_name",
Group.NAMES_AND_TAXONOMY), PROCESSING_SITE(
- "Processing Site", "processing_site", Group.MISCELLANEOUS), ENTITY_WEIGHT(
- "Entity Weight", "entity_weight", Group.MISCELLANEOUS), VERSION(
- "Version", "_version_", Group.MISCELLANEOUS), ALL("ALL", "text",
- Group.MISCELLANEOUS);
+ "Processing Site", "processing_site", Group.MISCELLENOUS), ENTITY_WEIGHT(
+ "Entity Weight", "entity_weight", Group.MISCELLENOUS), VERSION(
+ "Version", "_version_", Group.MISCELLENOUS), ALL("ALL", "text",
+ Group.MISCELLENOUS);
- private enum Group
+ public enum Group
{
- DATE_OF("Date Of"), NAMES_AND_TAXONOMY("Names & Taxonomy"),
- MISCELLANEOUS("Miscellaneous"), QUALITY_MEASURES("Quality Measures"),
- CROSS_REFS("Cross References"), PROCEDURE_AND_SOFTWARE(
- "Procedures & Softwares");
+ DATE_OF("Date Of", 5), NAMES_AND_TAXONOMY("Names & Taxonomy", 3),
+ MISCELLENOUS("Miscellenous", 6), QUALITY_MEASURES("Quality Measures",
+ 1), CROSS_REFS("Cross References", 2),
+ PROCEDURE_AND_SOFTWARE("Procedures & Softwares", 4);
- Group(String name)
+ Group(String name, int sortOrder)
{
this.name = name;
+ this.sortOrder = sortOrder;
}
private String name;
+ private int sortOrder;
+
public String getName()
{
return this.name;
}
+
+ public int getSortOrder()
+ {
+ return sortOrder;
+ }
+
+ @Override
+ public String toString()
+ {
+ return this.name;
+ }
};
private String name;
return code;
}
- public String getGroup()
+ public Group getGroup()
{
- return group.getName();
+ return group;
}
@Override
git://source.jalview.org / jalview.git / blobdiff