JAL-3615 used gzip endpoints for Pfam and Rfam

[jalview.git] / src / jalview / ws / dbsources / PfamSeed.java

diff --git a/src/jalview/ws/dbsources/PfamSeed.java b/src/jalview/ws/dbsources/PfamSeed.java
index 027db80..f64d07f 100644 (file)
--- a/src/jalview/ws/dbsources/PfamSeed.java
+++ b/src/jalview/ws/dbsources/PfamSeed.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -20,29 +20,23 @@
  */
 package jalview.ws.dbsources;
 
-import jalview.ws.seqfetcher.DbSourceProxy;
-
 /**
  * flyweight class specifying retrieval of Seed alignments from PFAM
  * 
  * @author JimP
  * 
  */
-public class PfamSeed extends Pfam implements DbSourceProxy
+public class PfamSeed extends Pfam
 {
   public PfamSeed()
   {
     super();
   }
 
-  /*
-   * (non-Javadoc)
-   * 
-   * @see jalview.ws.dbsources.Pfam#getPFAMURL()
-   */
-  protected String getXFAMURL()
+  @Override
+  public String getURLSuffix()
   {
-    return "http://pfam.sanger.ac.uk/family/alignment/download/format?alnType=seed&format=stockholm&order=t&case=l&gaps=default&entry=";
+    return "/alignment/seed" + GZIPPED;
   }
 
   /*
@@ -50,16 +44,19 @@ public class PfamSeed extends Pfam implements DbSourceProxy
    * 
    * @see jalview.ws.seqfetcher.DbSourceProxy#getDbName()
    */
+  @Override
   public String getDbName()
   {
     return "PFAM (Seed)";
   }
 
+  @Override
   public String getDbSource()
   {
     return jalview.datamodel.DBRefSource.PFAM; // archetype source
   }
 
+  @Override
   public String getTestQuery()
   {
     return "PF03760";