Updated with latest from mchmmer branch
[jalview.git] / src / jalview / ws / jws1 / JPredThread.java
index a239625..23d9eb0 100644 (file)
@@ -235,8 +235,7 @@ class JPredThread extends JWS1Thread implements WSClientI
           {
             // Adjust input view for gaps
             // propagate insertions into profile
-            alhidden = HiddenColumns.propagateInsertions(profileseq, al,
-                    input);
+            alhidden = al.propagateInsertions(profileseq, input);
           }
         }
       }