JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix delegate of
[jalview.git] / src / jalview / ws / sifts / SiftsClient.java
index a066915..df5aee9 100644 (file)
@@ -21,7 +21,7 @@
 package jalview.ws.sifts;
 
 import jalview.analysis.AlignSeq;
-import jalview.analysis.scoremodels.PairwiseSeqScoreModel;
+import jalview.analysis.scoremodels.ScoreMatrix;
 import jalview.analysis.scoremodels.ScoreModels;
 import jalview.api.DBRefEntryI;
 import jalview.api.SiftsClientI;
@@ -988,7 +988,7 @@ public class SiftsClient implements SiftsClientI
     output.append(String.valueOf(pdbEnd));
     output.append(NEWLINE).append(NEWLINE);
 
-    PairwiseSeqScoreModel pam250 = ScoreModels.getInstance().getPam250();
+    ScoreMatrix pam250 = ScoreModels.getInstance().getPam250();
     int matchedSeqCount = 0;
     for (int j = 0; j < nochunks; j++)
     {