JAL-3878 Add RNAalifold service discovery.

[jalview.git] / src / jalview / ws2 / slivka / SlivkaWSDiscoverer.java

diff --git a/src/jalview/ws2/slivka/SlivkaWSDiscoverer.java b/src/jalview/ws2/slivka/SlivkaWSDiscoverer.java
index 8534f06..ee3ddf9 100644 (file)
--- a/src/jalview/ws2/slivka/SlivkaWSDiscoverer.java
+++ b/src/jalview/ws2/slivka/SlivkaWSDiscoverer.java
@@ -169,10 +169,18 @@ public class SlivkaWSDiscoverer implements WebServiceDiscoverer
           {
             switch (path[path.length - 1].toLowerCase())
             {
-            case "sequence alignment analysis (conservation)":
+            case "rna secondary structure prediction":
               AnnotationOperation anop;
               op = anop = new AnnotationOperation(instance,
                   instance::getAnnotations, instance::getFeaturesFile,
+                  "Secondary Structure Prediction");
+              anop.setInteractive(true);
+              anop.setAlignmentAnalysis(true);
+              anop.setProteinOperation(false);
+              break;
+            case "sequence alignment analysis (conservation)":
+              op = anop = new AnnotationOperation(instance,
+                  instance::getAnnotations, instance::getFeaturesFile,
                   "Conservation");
               anop.setAlignmentAnalysis(true);
               anop.setInteractive(true);