Merge branch 'develop' into trialMerge
[jalview.git] / test / jalview / analysis / scoremodels / FeatureScoreModelTest.java
index 1da23ea..66eb5a5 100644 (file)
@@ -25,8 +25,8 @@ import jalview.datamodel.SequenceFeature;
 import jalview.datamodel.SequenceI;
 import jalview.gui.AlignFrame;
 import jalview.gui.JvOptionPane;
+import jalview.io.DataSourceType;
 import jalview.io.FileLoader;
-import jalview.io.FormatAdapter;
 
 import java.util.Arrays;
 
@@ -55,7 +55,7 @@ public class FeatureScoreModelTest
   public AlignFrame getTestAlignmentFrame()
   {
     AlignFrame alf = new FileLoader(false).LoadFileWaitTillLoaded(
-            alntestFile, FormatAdapter.PASTE);
+            alntestFile, DataSourceType.PASTE);
     AlignmentI al = alf.getViewport().getAlignment();
     Assert.assertEquals(al.getHeight(), 4);
     Assert.assertEquals(al.getWidth(), 5);
@@ -160,7 +160,7 @@ public class FeatureScoreModelTest
     String alignment = "a CCCCCCGGGGGGCCCCCC\n" + "b CCCCCCGGGGGGCCCCCC\n"
             + "c CCCCCCGGGGGGCCCCCC\n";
     AlignFrame af = new jalview.io.FileLoader(false)
-            .LoadFileWaitTillLoaded(alignment, FormatAdapter.PASTE);
+            .LoadFileWaitTillLoaded(alignment, DataSourceType.PASTE);
     SequenceI aseq = af.getViewport().getAlignment().getSequenceAt(0);
     SequenceFeature sf = null;
     sf = new SequenceFeature("disulphide bond", "", 2, 5, Float.NaN, "");