3253-omnibus save
[jalview.git] / test / jalview / ext / ensembl / EnsemblSeqProxyTest.java
index 27008f5..a4d6d92 100644 (file)
 package jalview.ext.ensembl;
 
 import static org.testng.AssertJUnit.assertEquals;
-import static org.testng.AssertJUnit.assertSame;
 
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.SequenceFeature;
 import jalview.datamodel.SequenceI;
-import jalview.datamodel.features.SequenceFeatures;
 import jalview.gui.JvOptionPane;
 import jalview.io.DataSourceType;
 import jalview.io.FastaFile;
@@ -34,8 +32,6 @@ import jalview.io.gff.SequenceOntologyFactory;
 import jalview.io.gff.SequenceOntologyLite;
 
 import java.lang.reflect.Method;
-import java.util.Arrays;
-import java.util.List;
 
 import org.testng.Assert;
 import org.testng.annotations.AfterClass;
@@ -223,7 +219,6 @@ public class EnsemblSeqProxyTest
     SequenceFeature sf = new SequenceFeature("sequence_variant", alleles,
             1, 2, 0f, null);
     sf.setValue("alleles", alleles);
-    sf.setAttributes("x=y,z;alleles=" + alleles + ";a=b,c");
 
     EnsemblSeqProxy.reverseComplementAlleles(sf);
     String revcomp = "G,C,GTA-,HGMD_MUTATION,gtc";
@@ -231,7 +226,5 @@ public class EnsemblSeqProxyTest
     assertEquals(revcomp, sf.getDescription());
     // verify alleles attribute is updated with reverse complement
     assertEquals(revcomp, sf.getValue("alleles"));
-    // verify attributes string is updated with reverse complement
-    assertEquals("x=y,z;alleles=" + revcomp + ";a=b,c", sf.getAttributes());
   }
 }