spike branch updated from latest features/JAL-2446

[jalview.git] / test / jalview / renderer / seqfeatures / FeatureRendererTest.java

diff --git a/test/jalview/renderer/seqfeatures/FeatureRendererTest.java b/test/jalview/renderer/seqfeatures/FeatureRendererTest.java
index 3e27aba..dc86605 100644 (file)
--- a/test/jalview/renderer/seqfeatures/FeatureRendererTest.java
+++ b/test/jalview/renderer/seqfeatures/FeatureRendererTest.java
@@ -267,15 +267,20 @@ public class FeatureRendererTest
     fr.filterFeaturesForDisplay(features, null); // empty list, does nothing
 
     SequenceI seq = av.getAlignment().getSequenceAt(0);
-    SequenceFeature sf1 = new SequenceFeature("Cath", "", 6, 8, "group1");
+    SequenceFeature sf1 = new SequenceFeature("Cath", "", 6, 8, Float.NaN,
+            "group1");
     seq.addSequenceFeature(sf1);
-    SequenceFeature sf2 = new SequenceFeature("Cath", "", 5, 11, "group2");
+    SequenceFeature sf2 = new SequenceFeature("Cath", "", 5, 11, 2f,
+            "group2");
     seq.addSequenceFeature(sf2);
-    SequenceFeature sf3 = new SequenceFeature("Cath", "", 5, 11, "group3");
+    SequenceFeature sf3 = new SequenceFeature("Cath", "", 5, 11, 3f,
+            "group3");
     seq.addSequenceFeature(sf3);
-    SequenceFeature sf4 = new SequenceFeature("Cath", "", 6, 8, "group4");
+    SequenceFeature sf4 = new SequenceFeature("Cath", "", 6, 8, 4f,
+            "group4");
     seq.addSequenceFeature(sf4);
-    SequenceFeature sf5 = new SequenceFeature("Cath", "", 6, 9, "group4");
+    SequenceFeature sf5 = new SequenceFeature("Cath", "", 6, 9, 5f,
+            "group4");
     seq.addSequenceFeature(sf5);
 
     fr.findAllFeatures(true);
@@ -329,6 +334,7 @@ public class FeatureRendererTest
 
     /*
      * no filtering of co-located features with graduated colour scheme
+     * filterFeaturesForDisplay does _not_ check colour threshold
      * sf2 is removed as its group is hidden
      */
     features = seq.getSequenceFeatures();