}
@Test(groups = { "Functional" })
- public void testGetColor_simpleColour()
+ public void testGetColour_simpleColour()
{
FeatureColour fc = new FeatureColour(Color.RED);
assertEquals(Color.RED,
- fc.getColor(new SequenceFeature("Cath", "", 1, 2, 0f, null)));
+ fc.getColour(new SequenceFeature("Cath", "", 1, 2, 0f, null)));
}
@Test(groups = { "Functional" })
- public void testGetColor_colourByLabel()
+ public void testGetColour_colourByLabel()
{
FeatureColour fc = new FeatureColour();
fc.setColourByLabel(true);
SequenceFeature sf = new SequenceFeature("type", "desc", 0, 20, 1f,
null);
Color expected = ColorUtils.createColourFromName("desc");
- assertEquals(expected, fc.getColor(sf));
+ assertEquals(expected, fc.getColour(sf));
}
@Test(groups = { "Functional" })
- public void testGetColor_Graduated()
+ public void testGetColour_Graduated()
{
// graduated colour from score 0 to 100, gray(128, 128, 128) to red(255, 0,
// 0)
float green = 128 / 255f + 3 / 4f * (0 - 128) / 255f;
float blue = 128 / 255f + 3 / 4f * (0 - 128) / 255f;
Color expected = new Color(red, green, blue);
- assertEquals(expected, fc.getColor(sf));
+ assertEquals(expected, fc.getColour(sf));
}
@Test(groups = { "Functional" })
- public void testGetColor_aboveBelowThreshold()
+ public void testGetColour_aboveBelowThreshold()
{
// gradient from [50, 150] from WHITE(255, 255, 255) to BLACK(0, 0, 0)
FeatureColour fc = new FeatureColour(Color.WHITE, Color.BLACK, 50f,
Float.NaN, null);
fc.setThreshold(100f); // ignore for now
- assertEquals(new Color(204, 204, 204), fc.getColor(sf));
- assertEquals(Color.white, fc.getColor(sf2));
+ assertEquals(new Color(204, 204, 204), fc.getColour(sf));
+ assertEquals(Color.white, fc.getColour(sf2));
fc.setAboveThreshold(true); // feature lies below threshold
- assertNull(fc.getColor(sf));
- assertEquals(Color.white, fc.getColor(sf2));
+ assertNull(fc.getColour(sf));
+ assertEquals(Color.white, fc.getColour(sf2));
fc.setBelowThreshold(true);
fc.setThreshold(70f);
- assertNull(fc.getColor(sf)); // feature score == threshold - hidden
- assertEquals(Color.white, fc.getColor(sf2));
+ assertNull(fc.getColour(sf)); // feature score == threshold - hidden
+ assertEquals(Color.white, fc.getColour(sf2));
fc.setThreshold(69f);
- assertNull(fc.getColor(sf)); // feature score > threshold - hidden
- assertEquals(Color.white, fc.getColor(sf2));
+ assertNull(fc.getColour(sf)); // feature score > threshold - hidden
+ assertEquals(Color.white, fc.getColour(sf2));
}
/**
}
@Test(groups = { "Functional" })
- public void testGetColor_colourByLabel_withThreshold()
+ public void testGetColour_colourByLabel_withThreshold()
{
FeatureColour fc = new FeatureColour();
fc.setColourByLabel(true);
null);
fc.setThreshold(0);
Color expected = ColorUtils.createColourFromName("desc");
- assertEquals(expected, fc.getColor(sf));
+ assertEquals(expected, fc.getColour(sf));
// score (1f) is above threshold
fc.setAboveThreshold(true);
- assertEquals(expected, fc.getColor(sf));
+ assertEquals(expected, fc.getColour(sf));
// score is not above threshold
fc.setThreshold(2f);
- assertNull(fc.getColor(sf));
+ assertNull(fc.getColour(sf));
// score is not below threshold
fc.setThreshold(0f);
fc.setBelowThreshold(true);
- assertNull(fc.getColor(sf));
+ assertNull(fc.getColour(sf));
// score is below threshold
fc.setThreshold(3f);
- assertEquals(expected, fc.getColor(sf));
+ assertEquals(expected, fc.getColour(sf));
}
}