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* Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
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+ <title>Introduction</title><link rel="stylesheet" href="site.css" type="text/css"><meta name="generator" content="DocBook XSL Stylesheets V1.65.1"><link rel="home" href="manual.html" title="Jalopy User Manual"><link rel="up" href="manual.html" title="Jalopy User Manual"><link rel="previous" href="acknowledge.html" title="Acknowledgements"><link rel="next" href="part-core.html" title="Part I. Jalopy core"><link rel="preface" href="dedication.html" title="Dedication"><link rel="preface" href="acknowledge.html" title="Acknowledgements"><link rel="preface" href="introduction.html" title="Introduction"><link rel="part" href="part-core.html" title="Part I. Jalopy core"><link rel="chapter" href="installation.html" title="Chapter 1. Installation"><link rel="chapter" href="build.html" title="Chapter 2. Building"><link rel="chapter" href="usage.html" title="Chapter 3. Usage"><link rel="chapter" href="settings.html" title="Chapter 4. Settings"><link rel="part" href="part-plugins.html" title="Part II. Plug-ins"><link rel="chapter" href="plugin-ant.html" title="Chapter 5. Ant Plug-in task"><link rel="chapter" href="plugin-console.html" title="Chapter 6. Console Application"><link rel="chapter" href="plugin-eclipse.html" title="Chapter 7. Eclipse Plug-in"><link rel="chapter" href="plugin-jbuilder.html" title="Chapter 8. JBuilder OpenTool"><link rel="chapter" href="plugin-jdev.html" title="Chapter 9. JDeveloper Extension"><link rel="chapter" href="plugin-jedit.html" title="Chapter 10. jEdit Plug-in"><link rel="chapter" href="plugin-netbeans.html" title="Chapter 11. NetBeans/Sun ONE Studio module"><link rel="appendix" href="dependencies.html" title="Appendix A. Library Dependencies"><link rel="appendix" href="license-bsd.html" title="Appendix B. The Jalopy BSD License"><link rel="appendix" href="license-antlr.html" title="Appendix C. ANTLR SOFTWARE RIGHTS"><link rel="appendix" href="license-apache.html" title="Appendix D. The Apache Software License, Version 1.1"><link rel="appendix" href="license-gnu.html" title="Appendix E. GNU GENERAL PUBLIC LICENSE Version 2, June 1991"><link rel="appendix" href="license-gnu-doc.html" title="Appendix F. GNU Free Documentation License Version 1.1, March 2000"><link rel="appendix" href="license-common-public.html" title="Appendix G. Common Public License Version 1.0"><link rel="appendix" href="license-sun-public.html" title="Appendix H. SUN PUBLIC LICENSE Version 1.0"><link rel="index" href="ix01.html" title="Index">
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+ </head><body id="toppage" bgcolor="white" text="black" link="#0000FF" vlink="#840084" alink="#0000FF"><table width="700" border="0" cellpadding="0" cellspacing="0" align="left"><tbody><tr><td><table cellpadding="0" cellspacing="0" width="100%" style="border:1px solid #336699"><tbody><tr><td height="16"></td></tr><tr><td bgcolor="#3399cc" height="1"></td></tr><tr style="border:none"><td style="border:none"><table border="0" cellspacing="0" cellpadding="0"><tbody><tr><td class="logo">JALOPY</td><td class="sublogo" valign="bottom">Java Source Code Formatter Beautifier Pretty Printer</td></tr></tbody></table></td></tr><tr><td bgcolor="#3399cc" height="1"></td></tr><tr><td height="10"></td></tr><tr><td bgcolor="#ff8000" height="4"></td></tr><tr><td height="20" bgcolor="#336699" style="color:#ffffff;padding-left:10px"><a href="./index.html" class="navlink">Overview</a> •
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+ This page generated: <strong>June 8 2004</strong></td></tr></tbody></table><table border="0" width="100%" cellspacing="0" cellpadding="5"><tr><td><div class="navheader"><table width="100%" summary="Navigation header"><tr><th colspan="3" align="center">Introduction</th></tr><tr><td width="20%" align="left"><a accesskey="p" href="acknowledge.html">Prev</a> </td><th width="60%" align="center"> </th><td width="20%" align="right"> <a accesskey="n" href="part-core.html">Next</a></td></tr></table><hr></div><div class="preface" lang="en"><div class="titlepage"><div><div><h2 class="title"><a name="introduction"></a>Introduction</h2></div></div><div></div></div><a class="indexterm" name="d0e637"></a><p>
+Jalopy is a source code formatting tool for the Sun Java Programming Language.
+It can insert and remove indentation, enforce brace styles, wrap lines, sort
+and group imports, add headers and footers, handle whitespace, insert/remove
+and correct Javadoc entries to match method signatures and much more.
+</p><p>
+If your development team can agree on a coding style, Jalopy can help you
+maintain it, without any browbeating or bloodletting. With a simple Ant target,
+you can format all the source into the style, as often as you like.
+</p><p>
+Jalopy is written in Java and there are several Plug-ins available to integrate
+the formatting engine into some of the more popular Java applications, including Ant,
+Eclipse, JBuilder, JDeveloper, jEdit and NetBeans/Sun ONE Studio.
+</p><p>
+Jalopy is
+"<span class="bold"><b><a href="http://opensource.org/docs/certification_mark.php" target="_top">OSI Certified Open Source Software</a></b></span>",
+released under a <a href="./license-bsd.html" target="_top">BSD License</a>.
+For the individual license terms of the provided Plug-ins, please refer to the
+different Plug-in chapters in <a href="part-plugins.html" title="Part II. Plug-ins">Part II, “Plug-ins”</a>.
+</p></div><div class="navfooter"><hr><table width="100%" summary="Navigation footer"><tr><td width="40%" align="left"><a accesskey="p" href="acknowledge.html">Prev</a> </td><td width="20%" align="center"><a accesskey="u" href="manual.html">Up</a></td><td width="40%" align="right"> <a accesskey="n" href="part-core.html">Next</a></td></tr><tr><td width="40%" align="left" valign="top">Acknowledgements </td><td width="20%" align="center"><a accesskey="h" href="manual.html">Home</a></td><td width="40%" align="right" valign="top"> Part I. Jalopy core</td></tr></table></div></td></tr></table></td></tr><tr><td bgcolor="#eeeecc" height="17" style="font-size:9px;padding-left:5px"><a href="#toppage">to top</a></td></tr><tr><td height="30"><br></td></tr><tr><td height="3"></td></tr><tr><td bgcolor="#336699" height="1"></td></tr><tr><td height="1"></td></tr><tr><td bgcolor="#336699" height="16"></td></tr><tr><td bgcolor="#ff9966" height="4"></td></tr><tr><td class="footer" align="center" height="15" valign="middle">
+ Copyright © 2001-2004, <a class="footer" href="./contact.html">Marco Hunsicker</a>. All rights reserved. Hosted by <a href="http://sourceforge.net">SourceForge.net</a></td></tr></tbody></table><img src="http://sourceforge.net/sflogo.php?group_id=45216&type=1" width="1" height="1" border="0" hspace="0" vspace="0" alt=""></body></html>
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