JAL-629 Test and fix --annotation --ssannotation args. Added a viewerType arg/subval...
authorBen Soares <b.soares@dundee.ac.uk>
Sat, 22 Apr 2023 00:26:15 +0000 (01:26 +0100)
committerBen Soares <b.soares@dundee.ac.uk>
Sat, 22 Apr 2023 00:26:15 +0000 (01:26 +0100)
commit0788111a588187a04dd0d254d70b055274cf2c9d
tree2c5da11a1f1b1954c787b7537135ef1ac8e38454
parentc71453f1c7de4cc250700c1b6dd39d061982e794
JAL-629 Test and fix --annotation --ssannotation args. Added a viewerType arg/subval. Fixed multi value getClosest...(). Added a jalview.bin.Launcher eclipse script.  Lots of tests for opening structures from CLI.
20 files changed:
src/jalview/bin/Commands.java
src/jalview/bin/Jalview.java
src/jalview/bin/Launcher.java
src/jalview/bin/argparser/Arg.java
src/jalview/bin/argparser/ArgParser.java
src/jalview/bin/argparser/ArgValuesMap.java
src/jalview/gui/AlignFrame.java
src/jalview/gui/StructureChooser.java
src/jalview/gui/StructureViewer.java
src/jalview/jbgui/GAlignFrame.java
src/jalview/jbgui/GPreferences.java
test/jalview/bin/CommandsTest2.java [new file with mode: 0644]
test/jalview/bin/commandsTest2.argfile1 [new file with mode: 0644]
test/jalview/bin/commandsTest2.argfile2 [new file with mode: 0644]
test/jalview/bin/commandsTest2.jvprops1 [new file with mode: 0644]
test/jalview/bin/commandsTest2.jvprops2 [new file with mode: 0644]
test/jalview/gui/StructureChooserTest.java
test/jalview/testProps.jvprops
test/jalview/ws/dbsources/EBIAlphaFoldTest.java
utils/eclipse/launcher [new file with mode: 0755]