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(parent: 44cbaf5) | patch
JAL-1919 Fixed failing tests, enabled HETATM processing from structure file to be...
authortcofoegbu <tcnofoegbu@dundee.ac.uk>
Fri, 8 Jul 2016 16:16:54 +0000 (17:16 +0100)
committertcofoegbu <tcnofoegbu@dundee.ac.uk>
Fri, 8 Jul 2016 16:16:54 +0000 (17:16 +0100)
commit0bec4854366c4bc4608ed0d7dc1506fc6afe2285
tree7c4b240c63342ce91105da17bd69cb5ee98e3895tree | snapshot
parent44cbaf5e4c094d90ef1294dd47c75a652e5f2509commit | diff
JAL-1919 Fixed failing tests, enabled HETATM processing from structure file to be configurable. Minor refactorings (StructureViewSettings class renamed to StructureImportSettings, fileName variables of AlignFile class renamed to dataObject since in realty it could be a file, url or pasted string)
16 files changed:
src/MCview/PDBChain.java diff | blob | history
src/MCview/PDBfile.java diff | blob | history
src/jalview/bin/Cache.java diff | blob | history
src/jalview/ext/jmol/JmolParser.java diff | blob | history
src/jalview/io/AlignFile.java diff | blob | history
src/jalview/io/AppletFormatAdapter.java diff | blob | history
src/jalview/io/StructureFile.java diff | blob | history
src/jalview/structure/StructureImportSettings.java [moved from src/jalview/structure/StructureViewSettings.java with 66% similarity] diff | blob | history
src/jalview/ws/dbsources/Pdb.java diff | blob | history
test/MCview/PDBChainTest.java diff | blob | history
test/jalview/ext/jmol/JmolParserTest.java diff | blob | history
test/jalview/gui/AlignViewportTest.java diff | blob | history
test/jalview/io/AnnotatedPDBFileInputTest.java diff | blob | history
test/jalview/structure/Mapping.java diff | blob | history
test/jalview/structure/StructureSelectionManagerTest.java diff | blob | history
test/jalview/ws/PDBSequenceFetcherTest.java diff | blob | history