JAL-1619 refactoring / tests to support 'align linked dna as protein'
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Thu, 22 Jan 2015 15:50:54 +0000 (15:50 +0000)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Thu, 22 Jan 2015 15:50:54 +0000 (15:50 +0000)
commit61f1a8b75ea5ce352d6214c34fbdcd58bafbbb73
treeed14c9cdfcbff1d57ea722814ee4bd91c462f35c
parente06580cb9fa7255844392883e96d5f9cbc680ec1
JAL-1619 refactoring / tests to support 'align linked dna as protein'
20 files changed:
resources/lang/Messages.properties
src/jalview/analysis/AlignmentUtils.java
src/jalview/datamodel/AlignedCodonFrame.java
src/jalview/datamodel/Alignment.java
src/jalview/datamodel/AlignmentI.java
src/jalview/datamodel/Mapping.java
src/jalview/datamodel/SearchResults.java
src/jalview/gui/AlignFrame.java
src/jalview/gui/AlignViewport.java
src/jalview/gui/CutAndPasteTransfer.java
src/jalview/gui/Desktop.java
src/jalview/gui/SequenceFetcher.java
src/jalview/io/FileLoader.java
src/jalview/jbgui/GAlignFrame.java
src/jalview/util/MapList.java
src/jalview/ws/AWSThread.java
test/jalview/analysis/AlignmentUtilsTests.java
test/jalview/datamodel/AlignedCodonFrameTest.java
test/jalview/datamodel/AlignmentTest.java
test/jalview/util/MapListTest.java